Detailed information NTG0705130

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: L4174_RS13625
• Genome accession: NZ_CP100425
• Coordinates: 2965977..2969408 (+)
• Length: 1143 a.a.
• NCBI ID: WP_248141427.1
• Uniprot ID: -
• Organism: Photobacterium sp. CCB-ST2H9
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2960977..2974408

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L4174_RS13605 (L4174_013605)	erpA	2961478..2961819 (-)	342	WP_248141423.1	iron-sulfur cluster insertion protein ErpA	-
L4174_RS13610 (L4174_013610)	hemL	2962011..2963306 (+)	1296	WP_248141424.1	glutamate-1-semialdehyde 2,1-aminomutase	-
L4174_RS13615 (L4174_013615)	-	2963512..2964594 (+)	1083	WP_248141425.1	AI-2E family transporter	-
L4174_RS13620 (L4174_013620)	rsmC	2964670..2965707 (+)	1038	WP_248141426.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
L4174_RS13625 (L4174_013625)	chiS	2965977..2969408 (+)	3432	WP_248141427.1	response regulator	Regulator
L4174_RS13630 (L4174_013630)	-	2970158..2971831 (+)	1674	WP_248141428.1	ABC transporter substrate-binding protein	-
L4174_RS13635 (L4174_013635)	-	2971974..2972963 (+)	990	WP_248141429.1	ABC transporter permease	-
L4174_RS13640 (L4174_013640)	-	2972966..2973994 (+)	1029	WP_248141430.1	ABC transporter permease	-

Sequence

Protein

• Length: 1143 a.a.
• Molecular weight: 128651.81 Da
• Isoelectric Point: 5.3784

>NTDB_id=705130 L4174_RS13625 WP_248141427.1 2965977..2969408(+) (chiS) [Photobacterium sp. CCB-ST2H9]
MQNTTRFKRLQHTLMLAFLLLSLIPLTLSSLFFLHSHTRDLAEQSTSHLASLRDNKSQQLDAFFAAKESEIQSFISSELA
NASGGRFYGIVGAFRQLGDIQRLSKGASRGEYFNQTLTTRPLSGHVDNTSPDFIVQERYRLIYKRYHWAYEAYLKRSDFS
DILLVDLDGNVVYTSRSPALFAASLSTETAQYPALSQTFRDIRTLTHQYRERRPENSRQPLSEQKSEQLPIAYTDFAADE
DTGEATAWFAAPIIQHGYLHSYAFFKLSNRAIAAVMANSSEGNQFVQTLLVGPDHNLRLPNDGQLPARLASPGIDQALSG
KTGVGSLLNYKQIPVLSAYAPIDVLGNPWALVVELPEQEAFARIHELEEFFLLAILAAVMLVTLTAHWLSNYITAPLLRL
TWAAEQVSAGDLDQKITSTDRRDEIGRLAISFARMQRSIREKITLIREQNTELEQNLAVIRQQNEELQTADKLKDEFLAT
TSHELRTPLHGMVGIAEALLAGANGPMQPSQQHQLDMIINSGQRLTKLVDDLLDYHKMRYGDLDIRPHAVDLAAANRLVL
ELSAHLLDNKPVRMINQIQPDLPLVLADEQRLEQVLYNLVGNAIKYTSEGKIILSATVLENQVRVQVVDTGQGIPPEQLE
HIFEPLVQANTGSANYRQGAGLGLSISRQLIELMGGSLYVSSQPMIGTTFSFTLPLATEADIARSQPATQTHFQAPRQEQ
SILETEKLPENPDGELLLVVDDEPVNLQVVTSFLRIAGYRVITAENGAQALNIMENQQPSLILLDVMMPGMNGYEVCQEL
RTRYSLTELPIIMLSALGQAQDRVKGFESGANDYLSKPFHKDELSARIRAHLQAAQTERQRHENQALQQEIRHREQVQAA
LLDTQTRLLGLLESTSEAILCAREDGRIRYANNAAGQLFQRAPAQLERLSVQDLLLTQLPDDIENNRHYRGELVYRIQDQ
NQTLATDLIQLPAESGLSQMFIFDQQGPSTKERITLLENAVDVLSGFASDGDKHSLQRLRELGDEFSQLADRLDLSQPDK
ADQLRHLLVEVMKNSLLFWESSTGKTKFDLAEESGLWRVYLDRSTLQTRTLDKYLHLETLPKTPRWRTVLNTLDFVLERC
PQASAERDNIVEMRNRLQLMISQ

Nucleotide

• Length: 3432 bp

>NTDB_id=705130 L4174_RS13625 WP_248141427.1 2965977..2969408(+) (chiS) [Photobacterium sp. CCB-ST2H9]
ATGCAGAATACCACCCGTTTCAAACGCCTCCAGCATACCCTGATGCTGGCGTTTCTTCTGCTCAGCCTGATCCCGCTCAC
GCTGTCTTCCCTGTTCTTTCTTCACTCCCACACCCGGGATCTGGCAGAACAGAGCACCAGCCACCTGGCGTCCTTGCGAG
ATAATAAAAGCCAACAACTGGATGCCTTCTTCGCAGCAAAAGAATCTGAAATTCAAAGTTTTATCAGCTCTGAGCTGGCC
AATGCCAGCGGGGGCCGTTTTTATGGAATCGTCGGGGCTTTTCGCCAGCTGGGGGATATTCAGCGCCTCAGCAAAGGCGC
CAGCCGGGGGGAATATTTTAATCAAACCCTGACCACCCGGCCGCTGTCCGGCCATGTCGATAATACCTCACCAGATTTTA
TCGTTCAGGAACGCTACCGCCTGATTTATAAACGTTATCACTGGGCATACGAAGCGTATCTCAAACGCTCGGATTTCAGC
GATATCCTGCTGGTCGATCTGGACGGTAACGTGGTTTATACCTCGCGCAGTCCGGCGCTGTTTGCCGCCAGCCTCAGTAC
CGAAACCGCACAGTATCCGGCGCTCAGCCAGACGTTCCGCGATATCCGGACCCTGACGCATCAGTACCGGGAACGCCGGC
CGGAGAATTCCCGCCAGCCGCTCAGCGAGCAAAAGTCTGAACAACTGCCTATCGCCTACACCGACTTTGCCGCCGATGAA
GACACGGGAGAAGCGACCGCCTGGTTCGCCGCCCCGATCATTCAGCATGGCTACCTGCACAGCTATGCTTTTTTCAAGCT
GAGCAACCGGGCGATCGCCGCCGTGATGGCGAACAGCAGCGAAGGCAACCAGTTCGTCCAGACGCTGCTGGTTGGCCCGG
ATCACAATCTGCGCCTGCCAAATGACGGTCAGCTGCCAGCCCGGCTTGCCAGTCCGGGCATTGATCAGGCCCTGTCCGGT
AAAACCGGTGTCGGCAGCCTGCTGAATTATAAACAGATCCCAGTTCTGAGTGCCTATGCCCCGATTGATGTGCTGGGCAA
TCCATGGGCGCTGGTGGTGGAATTACCCGAGCAGGAAGCCTTTGCACGTATTCACGAGCTTGAGGAATTTTTCCTTCTGG
CGATTCTGGCCGCGGTCATGCTGGTGACCCTGACCGCTCACTGGCTGTCCAACTACATTACGGCGCCCTTACTGCGGTTG
ACCTGGGCCGCGGAACAGGTTTCGGCTGGCGATCTGGATCAGAAAATCACCTCGACCGACCGACGAGATGAAATTGGCCG
CCTGGCAATCAGCTTCGCCCGCATGCAGCGATCCATCCGGGAAAAAATCACCCTGATCCGGGAGCAAAATACCGAACTGG
AACAGAATCTGGCCGTCATCCGGCAACAAAATGAAGAGTTACAGACAGCCGACAAGCTGAAAGATGAATTTCTGGCCACC
ACCTCACATGAACTCCGAACGCCATTGCACGGGATGGTGGGGATTGCGGAAGCCTTACTGGCCGGGGCGAACGGCCCGAT
GCAACCCAGCCAGCAACACCAGCTGGACATGATCATCAATAGCGGCCAGCGGCTGACCAAACTGGTCGATGACCTGCTCG
ACTACCATAAAATGCGCTATGGCGACCTCGACATCCGCCCCCATGCTGTCGATCTGGCTGCAGCCAACCGTCTGGTACTG
GAGCTGTCCGCACACCTGCTGGACAACAAACCGGTCCGGATGATTAACCAGATCCAGCCGGATCTGCCACTGGTTCTGGC
CGATGAACAGCGGCTGGAACAGGTGCTTTATAATCTGGTGGGGAATGCCATCAAATATACTTCCGAAGGCAAAATCATTC
TCTCCGCCACCGTCCTGGAAAATCAGGTCCGGGTTCAGGTGGTTGATACCGGCCAGGGGATCCCTCCGGAGCAGCTGGAA
CACATTTTTGAGCCCCTGGTACAGGCCAATACCGGGTCTGCCAACTACCGGCAGGGAGCCGGGCTGGGGCTGTCCATCAG
TCGCCAGCTGATTGAGTTGATGGGCGGCAGCCTTTATGTCAGCAGCCAGCCCATGATTGGAACAACCTTCAGCTTTACTC
TGCCGTTAGCGACGGAAGCCGATATTGCCCGCAGCCAGCCTGCAACCCAGACGCATTTTCAGGCTCCCCGTCAGGAACAA
AGCATACTGGAGACAGAAAAACTGCCGGAAAATCCGGATGGCGAACTCTTGCTGGTTGTGGATGACGAGCCGGTGAACCT
TCAGGTGGTAACCAGCTTCCTGCGGATTGCCGGTTACCGGGTGATCACCGCAGAAAACGGTGCCCAGGCGCTGAACATCA
TGGAAAATCAGCAACCTTCGCTGATCCTGCTGGATGTCATGATGCCCGGCATGAACGGATACGAAGTCTGTCAGGAACTG
CGGACCCGCTACAGTCTGACGGAACTGCCGATCATTATGCTGTCGGCACTGGGACAGGCCCAGGACAGGGTCAAAGGATT
TGAGAGCGGTGCCAACGATTATCTCAGTAAACCCTTTCATAAAGATGAACTCTCAGCCCGAATTCGCGCTCACTTGCAGG
CAGCACAGACAGAACGCCAGCGACATGAAAATCAGGCCCTGCAGCAGGAAATCCGCCACCGTGAACAGGTTCAGGCAGCG
CTGCTGGACACCCAGACCCGGCTGCTGGGATTGCTGGAATCCACCAGCGAGGCGATCCTCTGCGCCCGGGAAGACGGCCG
TATCCGCTATGCCAATAATGCCGCCGGGCAGCTGTTCCAGCGTGCACCGGCACAGCTGGAACGGTTATCCGTGCAGGATC
TCCTGCTGACCCAGTTGCCCGACGATATTGAAAATAACCGTCACTACCGCGGCGAACTCGTCTACCGGATCCAGGACCAG
AACCAGACGCTGGCCACCGATTTAATCCAGCTGCCAGCGGAATCCGGTCTCAGTCAGATGTTCATCTTTGACCAGCAGGG
CCCCAGCACCAAGGAACGGATTACGCTGCTGGAAAATGCAGTGGATGTCCTGTCCGGCTTTGCCTCAGACGGTGACAAGC
ATAGTCTGCAGCGGCTTCGCGAACTGGGCGACGAGTTCAGCCAGCTGGCCGATCGCCTGGACCTGTCGCAGCCGGACAAA
GCTGATCAGCTGCGCCATCTGCTGGTTGAGGTGATGAAAAACAGTCTGCTGTTCTGGGAAAGTAGCACAGGTAAAACCAA
ATTTGACCTGGCAGAAGAAAGCGGTCTGTGGCGGGTCTATCTCGACCGCAGCACGCTGCAGACACGCACGCTGGATAAGT
ACCTGCATCTCGAGACCCTGCCGAAAACACCGCGCTGGCGAACGGTCCTGAACACGCTGGATTTTGTTCTGGAGCGATGT
CCGCAGGCCAGTGCTGAAAGAGATAACATCGTAGAGATGCGAAACCGTCTGCAGCTGATGATCAGCCAGTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (388-441)

• Response regulator receiver domain (Response_reg) (738-848)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (588-697)

• His Kinase A (phospho-acceptor) domain (HisKA) (474-539)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	56.239	99.563	0.56