Detailed information NTG0704807

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: PDI73_RS07335
• Genome accession: NZ_CP115479
• Coordinates: 1552272..1555094 (-)
• Length: 940 a.a.
• NCBI ID: WP_017864935.1
• Uniprot ID: -
• Organism: Lactococcus lactis strain EP2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1547272..1560094

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PDI73_RS07300 (PDI73_07300)	-	1547500..1547949 (+)	450	WP_033899893.1	GNAT family N-acetyltransferase	-
PDI73_RS07310 (PDI73_07310)	-	1548123..1548914 (-)	792	WP_109991152.1	hypothetical protein	-
PDI73_RS07315 (PDI73_07315)	-	1549737..1550006 (-)	270	WP_033899889.1	hypothetical protein	-
PDI73_RS07320 (PDI73_07320)	-	1550150..1550725 (+)	576	WP_033899887.1	helix-turn-helix domain-containing protein	-
PDI73_RS07325 (PDI73_07325)	-	1550737..1551321 (+)	585	WP_023189068.1	hypothetical protein	-
PDI73_RS07330 (PDI73_07330)	-	1551458..1552039 (-)	582	WP_033899885.1	uracil-DNA glycosylase family protein	-
PDI73_RS07335 (PDI73_07335)	uvrA	1552272..1555094 (-)	2823	WP_017864935.1	excinuclease ABC subunit UvrA	Machinery gene
PDI73_RS07340 (PDI73_07340)	-	1555173..1555811 (-)	639	WP_003130310.1	hypothetical protein	-
PDI73_RS07345 (PDI73_07345)	-	1555880..1556404 (+)	525	WP_015426995.1	histidine phosphatase family protein	-
PDI73_RS07350 (PDI73_07350)	-	1556401..1556715 (+)	315	WP_010906152.1	GIY-YIG nuclease family protein	-
PDI73_RS07355 (PDI73_07355)	-	1556729..1558078 (-)	1350	WP_017864937.1	amino acid permease	-
PDI73_RS07360 (PDI73_07360)	-	1558561..1559478 (-)	918	WP_277730118.1	Gfo/Idh/MocA family oxidoreductase	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 104311.16 Da
• Isoelectric Point: 6.4770

>NTDB_id=704807 PDI73_RS07335 WP_017864935.1 1552272..1555094(-) (uvrA) [Lactococcus lactis strain EP2]
MPQDKIVIHGAREHNLKNIDVEIPRDKLVVVTGVSGSGKSSLAFETLYAEGQRRYVESLSAYARQFLGNMDKPDVDSIDG
LSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLYARVGTPYCVNGHGKISAQSVEEIVEQILELPEKTRLQILAPVVRTK
KGTHVKMFERIQKDGYVRVRVDGEVYDISEVPELDKNKKHNIEIVIDRIVVKEGIRSRLFDSVEAALHQAEGYVIVDKMD
GSELLFSEFYACPVCGFTVPELEPRLFSFNAPFGSCPDCDGLGVKLEPDVDLLIPDTSKTLREGAIIYWYGKASTYYPAL
LEQAMEQFGIDLDRPWEKLSEKEQQIVLYGNGDKLFHFLHEGDFGLRDQDMTFVGVIPNLWRRYRSGMSESAREMARSYM
TELTCTTCHGYRLNDQALSVKVGEKNIAEFSILSIGDTLDYVKSLVLSANNEIIAKPILKEIKDRLTFLKNVGLDYLTLS
RSSGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIESLQKMRDLGNTLIVVEHDEDTMMAADWLIDVG
PGAGDLGGEIIASGTPKQVMKNKKSLTGQYLSGKRAIPVPEKRRAIDKKKMVKITGASENNLQNLDVEFPMGVMTAVTGV
SGSGKSTLVNSILKKSLAQKLNHNSEKPGKHKKITGYEGIERLIDIDQSPIGRTPRSNPATYTSVFDDIRDLFANTNEAK
IRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCHGRRYNSETLEVHYKGKNISEVLDMRVSDGLEFFRH
IPKIERKLQTIVDVGLGYVTLGQPATTLSGGEAQRMKLASELQKRSNGKAFYILDEPTTGLHSEDIATLIQVLDRLVEQG
NTIVVIEHNLDVIKTADYIIDLGPEGGAGGGTILAKGRPEEVAKVADSYTGQYLKAKLEK

Nucleotide

• Length: 2823 bp

>NTDB_id=704807 PDI73_RS07335 WP_017864935.1 1552272..1555094(-) (uvrA) [Lactococcus lactis strain EP2]
ATGCCACAAGATAAAATAGTAATACATGGTGCACGTGAGCACAATTTAAAAAATATAGATGTTGAAATTCCAAGAGATAA
ATTAGTTGTTGTTACTGGGGTTTCAGGGTCTGGGAAATCATCTCTGGCCTTTGAAACTTTATATGCAGAAGGTCAACGTC
GATATGTTGAATCTTTGTCAGCTTATGCCAGACAGTTTTTAGGAAATATGGATAAACCAGATGTTGATTCAATTGATGGT
TTGTCGCCAGCAATCTCTATTGACCAAAAAACAACTTCTAAAAATCCTCGCTCAACAGTCGGGACGGTTACGGAAATTAA
TGACTATTTGCGTCTATTATACGCCCGTGTTGGGACGCCATATTGTGTGAATGGTCATGGAAAAATTTCGGCACAGTCAG
TTGAAGAAATTGTTGAACAAATTCTTGAACTCCCTGAAAAAACACGTTTACAAATTCTCGCTCCTGTCGTACGTACCAAA
AAAGGGACTCATGTTAAAATGTTTGAGCGTATCCAAAAAGATGGTTATGTTCGTGTTCGTGTTGATGGCGAAGTTTATGA
TATTTCAGAAGTTCCAGAACTTGATAAAAATAAAAAGCACAACATTGAAATTGTTATTGACCGGATTGTTGTAAAAGAAG
GAATTCGTTCGCGTCTTTTTGACTCTGTAGAGGCTGCGCTTCATCAGGCTGAGGGTTATGTTATTGTTGATAAAATGGAT
GGTTCAGAGCTTCTATTTAGTGAATTTTATGCCTGTCCAGTTTGTGGATTTACCGTTCCAGAACTTGAACCACGTCTTTT
CTCATTCAATGCTCCTTTTGGCTCATGCCCAGATTGTGATGGTTTAGGAGTTAAATTGGAACCCGATGTCGATTTATTGA
TTCCTGATACAAGCAAAACACTGCGTGAGGGGGCAATTATTTATTGGTATGGGAAAGCCTCAACTTATTACCCTGCTCTT
TTAGAGCAAGCAATGGAGCAATTCGGCATTGATTTAGATAGGCCTTGGGAAAAACTGTCAGAAAAAGAACAACAAATTGT
TTTATATGGAAATGGAGATAAACTTTTCCATTTTCTGCACGAAGGAGATTTTGGATTACGTGACCAAGATATGACCTTTG
TTGGGGTCATTCCTAATCTTTGGCGTCGTTATCGTTCAGGAATGAGCGAGTCAGCTAGAGAAATGGCGCGTTCTTACATG
ACTGAATTGACTTGTACGACTTGTCATGGTTATCGTTTAAATGATCAAGCACTTTCTGTTAAAGTGGGAGAGAAAAATAT
TGCTGAATTTTCAATTCTGTCAATTGGCGATACACTTGATTATGTGAAAAGTTTAGTTCTTTCTGCAAATAATGAAATTA
TCGCAAAACCTATTTTGAAAGAAATTAAAGACCGTTTGACTTTCTTGAAAAATGTTGGTTTGGATTATCTTACGCTATCT
CGTTCAAGCGGAACACTTTCTGGTGGAGAGTCACAACGCATTCGTTTAGCGACACAAATTGGTTCAAATTTATCAGGCGT
TTTGTATATTCTGGATGAACCTTCCATTGGTTTACATCAAAGAGATAATGACAGATTGATTGAGTCTTTACAAAAGATGC
GTGATTTGGGGAATACCTTAATTGTCGTTGAACATGATGAGGACACGATGATGGCAGCCGATTGGCTCATTGATGTTGGC
CCTGGGGCAGGTGATTTAGGAGGTGAAATTATTGCCTCTGGAACACCAAAACAAGTCATGAAAAATAAAAAATCACTGAC
AGGGCAATATTTGTCAGGAAAAAGAGCCATTCCAGTTCCCGAAAAACGTCGAGCCATTGATAAGAAAAAAATGGTCAAGA
TTACAGGTGCAAGTGAGAACAACTTGCAAAACCTTGACGTTGAGTTTCCAATGGGAGTTATGACGGCTGTAACTGGGGTT
TCTGGTTCTGGTAAATCAACTTTAGTTAACAGTATTTTAAAGAAATCATTAGCTCAAAAATTGAATCACAACTCAGAGAA
ACCTGGTAAGCATAAAAAAATTACTGGTTATGAAGGAATTGAGCGTTTGATTGATATTGACCAAAGTCCAATTGGTCGAA
CTCCACGTTCAAATCCGGCTACTTATACCAGCGTCTTTGATGACATTCGTGATTTATTTGCCAATACAAATGAAGCAAAA
ATTCGTGGTTATAAAAAAGGACGTTTCTCATTTAATGTTAAAGGTGGACGTTGTGAAGCCTGTTCTGGTGATGGAATCAT
CAAAATTGAAATGCATTTCTTGCCGGATGTTTATGTTCCATGTGAAGTTTGCCATGGCAGACGTTACAATTCAGAAACTT
TAGAAGTTCATTATAAAGGGAAGAATATTTCGGAAGTACTCGATATGCGCGTGTCTGATGGCTTGGAATTCTTCCGTCAT
ATTCCAAAAATTGAACGTAAACTCCAAACGATTGTTGATGTAGGTTTGGGATATGTGACGCTTGGACAACCGGCAACTAC
TTTATCAGGTGGGGAAGCTCAACGGATGAAATTAGCTTCTGAATTACAAAAACGTTCAAATGGTAAAGCTTTTTATATCT
TGGATGAACCAACAACTGGTTTGCACAGTGAAGATATTGCGACCCTGATTCAAGTATTAGACCGTTTGGTTGAACAAGGA
AATACGATTGTTGTCATTGAACATAATTTGGATGTCATTAAAACAGCAGATTACATCATCGACTTAGGTCCAGAAGGTGG
TGCTGGTGGTGGAACAATTCTTGCCAAAGGAAGACCAGAAGAGGTAGCAAAAGTTGCTGACAGCTATACTGGTCAGTATT
TGAAAGCAAAATTGGAAAAATAG

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (132-239)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-395)

• ABC transporter (ABC_tran) (622-858)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	77.553	100	0.776
uvrA	Streptococcus pneumoniae TIGR4	77.553	100	0.776
uvrA	Streptococcus pneumoniae D39	77.553	100	0.776