Detailed information NTG0704806

Bioinformatically predicted

Overview

• Name: recQ
• Type: Machinery gene
• Locus tag: PDI73_RS07260
• Genome accession: NZ_CP115479
• Coordinates: 1536930..1538708 (+)
• Length: 592 a.a.
• NCBI ID: WP_033899901.1
• Uniprot ID: -
• Organism: Lactococcus lactis strain EP2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1531930..1543708

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PDI73_RS07240 (PDI73_07240)	-	1532018..1533691 (-)	1674	WP_033899906.1	polysaccharide biosynthesis protein	-
PDI73_RS07245 (PDI73_07245)	-	1533901..1535352 (+)	1452	WP_033899905.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase	-
PDI73_RS07250 (PDI73_07250)	-	1535431..1535691 (-)	261	WP_017864931.1	hypothetical protein	-
PDI73_RS07255 (PDI73_07255)	adhP	1535712..1536734 (-)	1023	WP_033899903.1	alcohol dehydrogenase AdhP	-
PDI73_RS07260 (PDI73_07260)	recQ	1536930..1538708 (+)	1779	WP_033899901.1	DNA helicase RecQ	Machinery gene
PDI73_RS07265 (PDI73_07265)	yjeM	1538744..1540270 (-)	1527	WP_023189054.1	glutamate/gamma-aminobutyrate family transporter YjeM	-
PDI73_RS07270 (PDI73_07270)	pepT	1540550..1541791 (-)	1242	WP_277730117.1	peptidase T	-
PDI73_RS07275 (PDI73_07275)	-	1541820..1542617 (-)	798	WP_023189056.1	DUF1803 domain-containing protein	-
PDI73_RS07280 (PDI73_07280)	-	1542617..1543561 (-)	945	WP_033899897.1	manganese-dependent inorganic pyrophosphatase	-

Sequence

Protein

• Length: 592 a.a.
• Molecular weight: 67071.03 Da
• Isoelectric Point: 6.4494

>NTDB_id=704806 PDI73_RS07260 WP_033899901.1 1536930..1538708(+) (recQ) [Lactococcus lactis strain EP2]
MNLEAKLKEIFGYDNFRNGQKQIIEQVLDGQATLGILPTGAGKSICYQLPALIQPGLTLVISPLISLMKDQVDQLNIAGI
PATFINSTLEDSESYQRMRQVENGEIKLLFVAPERFSLDYFNAFLQKLPIDLVAIDEAHCISQWGHDFRPSYVDFASHLQ
YLPTNPTVLALTATATPKVADDIQKLLSISPSHTIKTGFLRENLRFEVVKGMDKRTFLKNYLKNQESEAAGIIYASTRKE
VEEICEWLNHNHFKAVRYHAGLSEQERQINQELFLFDEVPIMVATNAFGMGINKPNVRFVIHYALPATIESYYQEAGRAG
RDWLESDAILLFSPNDLRIRNFLIEQSEGDEAHKEHEYEKLRQMQAYTSAETCLQRYILQYFGDEGEDCKKCSNCLDERE
LLDITIDAQKVLSCVVRMGERFGKTAVAQVLIGSKNKNIAKWNFESLSTFGIMKNHSQKTVGELIDFLSAESYLNITSGK
FPLLLLSAQGLKVLKGQIKVYRKASLIIESKTKISHHFDEECFASIRALRLELAKEEGVPPFMIFSDSALKEMAQVLPDS
QSQFLQISGVGPVKLKKYGRLFIDKISEYKKS

Nucleotide

• Length: 1779 bp

>NTDB_id=704806 PDI73_RS07260 WP_033899901.1 1536930..1538708(+) (recQ) [Lactococcus lactis strain EP2]
ATGAATTTAGAAGCTAAATTAAAAGAAATTTTTGGTTATGACAATTTCCGAAATGGTCAGAAACAAATTATTGAACAAGT
CCTAGATGGACAAGCCACTCTTGGTATTTTACCCACAGGAGCTGGAAAATCAATCTGCTATCAGTTACCAGCTCTTATTC
AACCAGGGCTTACTCTCGTAATCTCCCCACTTATTAGCTTGATGAAAGATCAAGTCGACCAGCTGAATATTGCCGGAATT
CCAGCAACATTTATTAACTCTACCTTAGAGGATTCCGAATCTTATCAAAGAATGCGACAGGTTGAAAATGGTGAAATCAA
GCTTCTTTTTGTAGCACCAGAGCGTTTTTCATTAGACTATTTCAATGCCTTTTTACAAAAACTTCCAATTGATTTAGTTG
CCATAGACGAAGCACACTGTATTTCACAATGGGGGCACGATTTCAGACCCAGTTATGTCGATTTTGCCTCTCATCTCCAA
TATTTACCAACAAATCCTACCGTCTTAGCCCTTACGGCTACTGCGACACCAAAAGTTGCAGATGATATTCAAAAACTTCT
TTCAATTTCCCCCAGTCATACTATTAAAACCGGTTTTCTTAGAGAAAACTTACGTTTTGAAGTAGTCAAAGGGATGGATA
AGAGAACTTTTCTTAAAAATTATCTTAAAAATCAAGAAAGTGAGGCTGCTGGAATTATCTATGCCAGCACTCGTAAAGAA
GTTGAAGAAATTTGTGAATGGCTCAACCATAATCATTTCAAAGCCGTTCGTTACCATGCTGGACTGAGCGAACAGGAACG
TCAAATAAATCAAGAACTTTTTCTCTTTGACGAAGTACCGATAATGGTTGCCACTAATGCTTTTGGCATGGGAATCAATA
AACCAAATGTTCGATTTGTGATTCATTATGCCCTTCCCGCAACAATTGAAAGTTATTATCAAGAAGCTGGGCGAGCAGGA
CGGGACTGGCTTGAATCTGATGCTATCCTCCTTTTTTCACCAAATGATTTACGAATTCGTAATTTCTTGATTGAGCAAAG
TGAAGGTGATGAAGCGCACAAGGAACATGAATACGAAAAGCTTCGACAAATGCAAGCATACACAAGTGCCGAAACCTGTT
TACAACGTTATATCTTGCAATATTTTGGTGATGAAGGTGAAGATTGTAAAAAATGTAGTAATTGTCTTGATGAAAGAGAG
CTTCTCGATATTACAATTGATGCTCAAAAAGTCCTATCTTGTGTCGTCCGAATGGGTGAACGTTTTGGTAAGACGGCCGT
AGCACAAGTTTTGATTGGTTCTAAAAATAAAAATATTGCAAAATGGAATTTTGAATCTCTATCGACTTTTGGAATTATGA
AAAACCATTCCCAAAAGACCGTGGGTGAATTAATCGATTTTCTATCTGCTGAAAGTTATTTAAACATTACATCAGGTAAA
TTCCCACTTCTCCTTCTTTCAGCCCAAGGATTAAAAGTCCTCAAAGGACAAATCAAAGTTTATCGCAAAGCTAGCCTAAT
TATTGAATCGAAAACAAAAATTTCTCATCATTTTGATGAAGAATGTTTTGCAAGTATTCGTGCACTTCGACTTGAACTAG
CCAAGGAAGAAGGCGTCCCTCCTTTCATGATTTTTTCTGATAGTGCCCTTAAAGAAATGGCTCAAGTTCTGCCGGATAGT
CAAAGTCAATTTTTACAAATTTCTGGTGTCGGACCTGTTAAACTCAAAAAATATGGAAGGCTTTTTATCGACAAAATATC
TGAATATAAAAAAAGCTGA

Domains

Predicted by InterProScan.

• DEAD/DEAH box helicase (DEAD) (19-179)

• HRDC domain (HRDC) (520-584)

• Helicase conserved C-terminal domain (Helicase_C) (214-321)

• RecQ zinc-binding (RecQ_Zn_bind) (335-396)

• RQC domain (RQC) (399-503)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recQ	Bacillus subtilis subsp. subtilis str. 168	51.107	99.155	0.507