Detailed information NTG0070442

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: EL335_RS00665
• Genome accession: NZ_AP018718
• Coordinates: 139258..140298 (-)
• Length: 346 a.a.
• NCBI ID: WP_126443767.1
• Uniprot ID: -
• Organism: Sulfuricystis multivorans strain J5B
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 134258..145298

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL335_RS00645	-	134603..135163 (-)	561	WP_126443763.1	CheB methylesterase domain-containing protein	-
EL335_RS00650	-	135160..135951 (-)	792	WP_126443764.1	CheR family methyltransferase	-
EL335_RS00655	-	135965..137608 (-)	1644	WP_126443765.1	methyl-accepting chemotaxis protein	-
EL335_RS00660	-	137657..139261 (-)	1605	WP_126443766.1	NAD(P)/FAD-dependent oxidoreductase	-
EL335_RS00665	pilA	139258..140298 (-)	1041	WP_126443767.1	signaling recognition particle receptor family protein	Machinery gene
EL335_RS00670	-	140371..141738 (+)	1368	WP_126443768.1	pitrilysin family protein	-
EL335_RS00675	-	141750..143036 (+)	1287	WP_126443769.1	pitrilysin family protein	-
EL335_RS00680	-	143077..143307 (+)	231	WP_126443770.1	DUF4258 domain-containing protein	-
EL335_RS00685	-	143304..143489 (+)	186	WP_126443771.1	DUF2283 domain-containing protein	-
EL335_RS00690	-	143585..144145 (-)	561	WP_172599981.1	FlgO family outer membrane protein	-
EL335_RS00695	-	144142..144813 (-)	672	WP_126443772.1	hypothetical protein	-
EL335_RS00700	-	144957..145292 (+)	336	WP_126443773.1	helix-turn-helix transcriptional regulator	-

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 37012.83 Da
• Isoelectric Point: 9.0863

>NTDB_id=70442 EL335_RS00665 WP_126443767.1 139258..140298(-) (pilA) [Sulfuricystis multivorans strain J5B]
MFGFLKKDRPAEEAPARPSWAQRLKAGLAKTRAALTTPLSELFSRTKIDDELLEELEATLLMADCGVEATQWLLDRLKAK
VKKEKLESPADLRAALIDLMTELLEPLEAPLEVGTHKPFIIMIAGVNGAGKTTSIGKLAHRFQNEGKRVLLAAGDTFRAA
AREQLIEWGRRNDVTVISQPSAPPANLASLDSPPKGARNSRGGPSSFSGDPAAVVFDAIAAARARGLDIVLADTAGRLPT
QLNLMEEISKVRRVIQKAEPTGPHEVLLVLDANIGQNAIAQVKAFDKAIDVTGLIVTKLDGTAKGGVLAAIARQCPKPVR
FIGVGEGIDDLQPFKAREFVAALFGA

Nucleotide

• Length: 1041 bp

>NTDB_id=70442 EL335_RS00665 WP_126443767.1 139258..140298(-) (pilA) [Sulfuricystis multivorans strain J5B]
ATGTTTGGTTTCCTGAAGAAAGACCGTCCCGCGGAAGAGGCGCCGGCCAGACCCTCCTGGGCACAGCGCCTCAAGGCCGG
CCTGGCGAAGACGCGCGCGGCGCTGACCACGCCGCTTTCCGAACTCTTTTCGCGCACGAAGATCGACGATGAACTGCTCG
AAGAGCTCGAAGCGACGCTCTTGATGGCCGATTGCGGCGTCGAGGCGACGCAATGGCTGCTCGATCGGCTCAAGGCGAAA
GTCAAGAAAGAAAAGCTCGAATCGCCTGCGGACTTGCGTGCGGCGCTGATCGACCTGATGACGGAACTCCTCGAGCCATT
GGAAGCGCCGCTCGAAGTCGGCACGCACAAGCCGTTCATCATCATGATCGCCGGGGTCAATGGCGCCGGCAAGACCACCT
CGATCGGCAAGCTCGCCCACCGCTTCCAGAACGAGGGCAAACGCGTGTTGCTCGCCGCCGGCGACACCTTCCGCGCCGCG
GCGCGCGAGCAGCTCATCGAGTGGGGGCGCCGCAACGACGTCACCGTGATCAGCCAGCCATCAGCCCCCCCCGCAAATCT
CGCTTCGCTCGATTCTCCCCCCAAGGGGGCGAGAAACTCTCGGGGCGGCCCGTCGAGTTTCTCCGGCGATCCGGCCGCGG
TGGTGTTCGATGCGATCGCCGCCGCGCGAGCGCGCGGACTAGACATCGTGTTGGCCGATACCGCCGGTCGTCTGCCGACA
CAGCTCAACCTGATGGAAGAGATCAGTAAGGTGCGCCGTGTGATCCAGAAGGCGGAACCCACTGGCCCGCACGAAGTGCT
CTTGGTGCTCGATGCCAACATTGGCCAGAACGCGATTGCCCAAGTCAAGGCTTTCGACAAGGCGATCGATGTCACGGGGT
TGATCGTCACCAAGCTCGACGGCACCGCCAAGGGCGGGGTGCTCGCGGCGATCGCGCGCCAGTGCCCGAAACCGGTGCGC
TTCATCGGCGTCGGCGAAGGCATCGACGATCTGCAGCCGTTCAAGGCGCGCGAGTTCGTCGCGGCGTTGTTCGGCGCGTG
A

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (119-182)

• SRP54-type protein, GTPase domain (SRP54) (209-344)

• SRP54-type protein, helical bundle domain (SRP54_N) (39-98)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	58.282	94.22	0.549