Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   PDI54_RS02385 Genome accession   NZ_CP115472
Coordinates   518468..519271 (+) Length   267 a.a.
NCBI ID   WP_001134194.1    Uniprot ID   A0A0H2XEM8
Organism   Staphylococcus aureus strain AF4001     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 513468..524271
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PDI54_RS02365 (PDI54_02365) - 515014..516351 (+) 1338 WP_000812829.1 aminotransferase class V-fold PLP-dependent enzyme -
  PDI54_RS02370 (PDI54_02370) tmk 516353..516970 (+) 618 WP_001272126.1 dTMP kinase -
  PDI54_RS02375 (PDI54_02375) - 516998..517327 (+) 330 WP_000781979.1 cyclic-di-AMP receptor -
  PDI54_RS02380 (PDI54_02380) - 517541..518467 (+) 927 WP_000344336.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  PDI54_RS02385 (PDI54_02385) yaaT 518468..519271 (+) 804 WP_001134194.1 stage 0 sporulation family protein Regulator
  PDI54_RS02390 (PDI54_02390) yabA 519288..519635 (+) 348 WP_000375683.1 DNA replication initiation control protein YabA -
  PDI54_RS02395 (PDI54_02395) - 519909..520634 (+) 726 WP_000910686.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  PDI54_RS02400 (PDI54_02400) - 520627..520875 (+) 249 WP_000377064.1 GIY-YIG nuclease family protein -
  PDI54_RS02405 (PDI54_02405) rsmI 520877..521716 (+) 840 WP_000279926.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  PDI54_RS02410 (PDI54_02410) metG 522001..523974 (+) 1974 WP_001051136.1 methionine--tRNA ligase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30232.89 Da        Isoelectric Point: 4.5801

>NTDB_id=704241 PDI54_RS02385 WP_001134194.1 518468..519271(+) (yaaT) [Staphylococcus aureus strain AF4001]
MPNVIGVQFQKAGKLEYYTPNDIQVDIEDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPLKNIIRIADDKDIDKFNCNER
DAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
LDISMQVKLEGHEQPLEYKLEEIETMH

Nucleotide


Download         Length: 804 bp        

>NTDB_id=704241 PDI54_RS02385 WP_001134194.1 518468..519271(+) (yaaT) [Staphylococcus aureus strain AF4001]
ATGCCAAATGTAATAGGTGTTCAGTTTCAAAAAGCGGGAAAATTAGAATATTATACACCTAATGATATACAAGTAGATAT
AGAAGACTGGGTAGTTGTCGAATCTAAAAGAGGCATAGAGATAGGTATTGTTAAAAATCCATTAATGGATATTGCTGAAG
AGGATGTTGTGTTACCTCTTAAAAATATTATTCGCATTGCTGATGACAAAGATATTGATAAATTTAATTGTAATGAACGA
GATGCTGAAAATGCATTAATACTATGTAAAGACATTGTAAGAGAACAAGGTTTGGACATGCGTTTAGTCAATTGCGAATA
TACATTAGATAAATCGAAAGTTATTTTTAATTTTACGGCGGATGATCGTATTGATTTTAGAAAATTAGTAAAAATATTAG
CGCAACATTTAAAAACACGTATCGAGTTGAGACAAATTGGTGTAAGGGATGAAGCCAAATTGCTTGGCGGTATCGGACCT
TGTGGTAGGTCGTTATGTTGTTCTACATTTTTAGGGGATTTTGAACCAGTATCGATTAAGATGGCTAAGGATCAAAATTT
ATCATTAAATCCAACTAAAATTTCTGGTGCATGTGGTCGTTTGATGTGTTGTTTAAAATATGAAAATGACTATTATGAGG
AAGTACGTGCACAATTACCTGATATTGGTGAAGCAATTGAAACGCCTGATGGTAACGGGAAAGTAGTTGCTTTAAATATA
TTAGACATTTCTATGCAGGTGAAGCTTGAGGGACATGAACAGCCACTTGAATATAAATTAGAAGAAATAGAAACTATGCA
TTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2XEM8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

62.357

98.502

0.614