Detailed information NTG0704119

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: PCS90_RS19780
• Genome accession: NZ_CP115386
• Coordinates: 4040748..4041953 (+)
• Length: 401 a.a.
• NCBI ID: WP_001161835.1
• Uniprot ID: -
• Organism: Escherichia coli strain CUVET20-PYO2
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 4035748..4046953

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PCS90_RS19765 (PCS90_19710)	-	4036263..4037939 (+)	1677	WP_001298258.1	polysaccharide biosynthesis/export family protein	-
PCS90_RS19770 (PCS90_19715)	kdsB	4037949..4038689 (+)	741	WP_000030745.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PCS90_RS19775 (PCS90_19720)	-	4038686..4040713 (+)	2028	WP_000579517.1	capsular polysaccharide biosynthesis protein	-
PCS90_RS19780 (PCS90_19725)	kpsS	4040748..4041953 (+)	1206	WP_001161835.1	capsule biosynthesis protein	Regulator
PCS90_RS19785 (PCS90_19730)	-	4042103..4043332 (-)	1230	WP_000575410.1	alpha-2,8-polysialyltransferase family protein	-
PCS90_RS19790 (PCS90_19735)	-	4043322..4044470 (-)	1149	WP_024188362.1	DUF6716 putative glycosyltransferase	-
PCS90_RS19795 (PCS90_19740)	neuC	4044463..4045638 (-)	1176	WP_000723250.1	UDP-N-acetylglucosamine 2-epimerase	-
PCS90_RS19800 (PCS90_19745)	-	4045635..4046891 (-)	1257	WP_001259305.1	cytidylyltransferase domain-containing protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47858.21 Da
• Isoelectric Point: 10.0398

>NTDB_id=704119 PCS90_RS19780 WP_001161835.1 4040748..4041953(+) (kpsS) [Escherichia coli strain CUVET20-PYO2]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNWVYYGGNTTNCQHNI
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=704119 PCS90_RS19780 WP_001161835.1 4040748..4041953(+) (kpsS) [Escherichia coli strain CUVET20-PYO2]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGACGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTCCCCGGATGGTTACGGGATCTCCACCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGTTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAAGAAGGATATTTACGTCCGCAGTTTATTACTGTTGAAGAAGGCGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGTTGGCATTACCGTCATGAGTTCCCTCGCTACCGCCACCACAA
ATCGTTTTCCCCCTGGTATGAGGCTCGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTGCCGAGGTTAATGAACGAGCTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCACCGAAAGA
AAGTTATTTGGTGATCAAGCACCATCCAATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGCTAAGTAAGG
AATATGGCTTAGGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACGCAGGTTAATTGGGTTTATTATGGGGGGAACACAACAAACTGCCAACATAATATA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.846	97.007	0.387