Detailed information NTG0704111

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NIX85_RS14955
• Genome accession: NZ_CP100285
• Coordinates: 3221265..3222452 (+)
• Length: 395 a.a.
• NCBI ID: WP_100555697.1
• Uniprot ID: -
• Organism: Burkholderia glumae strain BGR48S
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3216265..3227452

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NIX85_RS14930	hisC	3216698..3217765 (+)	1068	WP_035983605.1	histidinol-phosphate transaminase	-
NIX85_RS14935	-	3217830..3218099 (-)	270	WP_015877053.1	YfhL family 4Fe-4S dicluster ferredoxin	-
NIX85_RS14940	-	3218385..3219707 (+)	1323	WP_017424335.1	TIGR00366 family protein	-
NIX85_RS14945	coaD	3219852..3220352 (-)	501	WP_015877055.1	pantetheine-phosphate adenylyltransferase	-
NIX85_RS14950	rsmD	3220463..3221077 (-)	615	WP_035983602.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
NIX85_RS14955	pilA	3221265..3222452 (+)	1188	WP_100555697.1	signal recognition particle-docking protein FtsY	Machinery gene
NIX85_RS14960	ybiB	3223022..3223999 (+)	978	WP_015877058.1	DNA-binding protein YbiB	-
NIX85_RS14965	leuA	3224413..3226062 (+)	1650	WP_017423452.1	2-isopropylmalate synthase	-
NIX85_RS14970	-	3226259..3226645 (-)	387	WP_015877060.1	nuclear transport factor 2 family protein	-
NIX85_RS14975	-	3226685..3227254 (-)	570	WP_017423453.1	acyloxyacyl hydrolase	-

Sequence

Protein

• Length: 395 a.a.
• Molecular weight: 41161.17 Da
• Isoelectric Point: 5.4803

>NTDB_id=704111 NIX85_RS14955 WP_100555697.1 3221265..3222452(+) (pilA) [Burkholderia glumae strain BGR48S]
MFSFFKRLIGSKADDASQDAPAADEQASAAHAPDAAGHAAAAASRPAPAPAHDTEPTASPAAPVPAAPAPAAAPAPAAVP
AAPAVEVVPPPAPEPAAKKSWIARLRSGLSKTSTSLTNVFVNTRIDDELYEELEAALLMSDAGIDATEYLLGALREKVRA
ERLSDPLQVKAALRALLVDLLAPLEKSLMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQRFDQSVLLAAGDTFRAAARE
QLAIWGERNNVTVVQQESGDPAAVIFDAVGAARARKIDVVMADTAGRLPTQLHLMEELRKVKRVIGKAQSDAPHEVLLVI
DANTGQNALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPIPVYFIGVGEKVEDLQPFNAEEFADALLG

Nucleotide

• Length: 1188 bp

>NTDB_id=704111 NIX85_RS14955 WP_100555697.1 3221265..3222452(+) (pilA) [Burkholderia glumae strain BGR48S]
ATGTTCAGCTTCTTCAAACGATTGATCGGCTCGAAGGCCGACGACGCGTCGCAGGACGCGCCGGCGGCCGACGAGCAAGC
CAGCGCGGCTCACGCGCCGGACGCGGCCGGGCATGCCGCCGCCGCGGCGAGCCGGCCGGCGCCCGCGCCGGCACACGACA
CCGAACCCACCGCCAGCCCGGCTGCACCGGTGCCGGCCGCCCCCGCCCCTGCGGCCGCCCCCGCCCCTGCGGCCGTGCCC
GCCGCCCCCGCCGTCGAAGTCGTGCCGCCGCCCGCGCCTGAGCCGGCCGCGAAAAAATCCTGGATTGCACGACTACGCTC
CGGGCTCTCGAAGACGAGCACGAGCCTCACCAACGTGTTCGTCAATACCAGGATCGACGACGAACTCTACGAGGAGCTCG
AAGCCGCGCTGCTGATGTCCGATGCCGGCATCGACGCGACCGAATACCTGCTCGGCGCGCTGCGCGAGAAGGTGCGCGCC
GAACGCCTGAGCGATCCGCTGCAGGTGAAGGCCGCGCTGCGCGCGCTGCTCGTCGACCTGCTCGCGCCGCTCGAGAAATC
GCTGATGCTGGGCCGCGCCCAGCCGCTCGTGATGATGATCGCGGGCGTCAACGGAGCCGGCAAGACCACCAGCATCGGTA
AGCTCGCCAAGCACCTGCAGCGCTTCGACCAATCGGTGCTGCTGGCCGCCGGCGACACGTTCCGCGCGGCCGCGCGCGAG
CAGCTCGCGATCTGGGGCGAGCGCAACAACGTGACCGTGGTGCAGCAGGAAAGCGGCGATCCGGCCGCCGTGATATTCGA
TGCGGTCGGCGCCGCGCGCGCGCGCAAGATCGACGTGGTGATGGCCGACACCGCGGGCCGGTTGCCCACGCAGTTGCACC
TGATGGAGGAACTGCGCAAGGTCAAGCGCGTGATCGGCAAGGCGCAGAGCGACGCGCCGCACGAGGTGCTGCTCGTGATC
GACGCCAATACCGGCCAGAACGCGCTCGCCCAGGTGAAGGCATTCGACGACGCGCTGGGCCTGACCGGGCTCATCGTCAC
CAAGCTCGACGGCACCGCGAAGGGCGGCATTCTCGCCGCGATCGCGCGGCAGCGGCCGATACCCGTCTACTTCATCGGCG
TCGGCGAGAAGGTCGAGGACTTGCAGCCGTTCAACGCCGAGGAATTCGCCGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (114-174)

• SRP54-type protein, GTPase domain (SRP54) (196-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.773	100	0.554