Detailed information NTG0704056

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NIX86_RS15900
• Genome accession: NZ_CP100262
• Coordinates: 3387184..3388341 (+)
• Length: 385 a.a.
• NCBI ID: WP_257813167.1
• Uniprot ID: -
• Organism: Burkholderia glumae strain BGR79S
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3382184..3393341

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NIX86_RS15875	hisC	3382613..3383680 (+)	1068	WP_257813166.1	histidinol-phosphate transaminase	-
NIX86_RS15880	-	3383745..3384014 (-)	270	WP_015877053.1	YfhL family 4Fe-4S dicluster ferredoxin	-
NIX86_RS15885	-	3384304..3385626 (+)	1323	WP_015877054.1	TIGR00366 family protein	-
NIX86_RS15890	coaD	3385771..3386271 (-)	501	WP_015877055.1	pantetheine-phosphate adenylyltransferase	-
NIX86_RS15895	rsmD	3386382..3386996 (-)	615	WP_035983602.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
NIX86_RS15900	pilA	3387184..3388341 (+)	1158	WP_257813167.1	signal recognition particle-docking protein FtsY	Machinery gene
NIX86_RS15905	-	3388304..3388711 (-)	408	WP_257813168.1	hypothetical protein	-
NIX86_RS15910	ybiB	3388912..3389889 (+)	978	WP_015877058.1	DNA-binding protein YbiB	-
NIX86_RS15915	leuA	3390303..3391952 (+)	1650	WP_161521126.1	2-isopropylmalate synthase	-
NIX86_RS15920	-	3392149..3392535 (-)	387	WP_015877060.1	nuclear transport factor 2 family protein	-
NIX86_RS15925	-	3392575..3393144 (-)	570	WP_015877061.1	acyloxyacyl hydrolase	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 40221.19 Da
• Isoelectric Point: 5.7227

>NTDB_id=704056 NIX86_RS15900 WP_257813167.1 3387184..3388341(+) (pilA) [Burkholderia glumae strain BGR79S]
MFSFFKRLIGSKADDAPAADEQASAAHAPDAAGHAAAAASRPAPAPAHDAEPAASPAAPVPAAPAPAAVPAAPAVEVVPP
PAPEPAAKKSWIARLRSGLSKTSTSLTNVFVNTRIDDELYEELEAALLMSDAGIDATEYLLGALREKVRAERLSDPLQVK
AALRALLVDLLAPLEKSLMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQRFDQSVLLAAGDTFRAAAREQLAIWGERNN
VTVVQQESGDPAAVIFDAVGAARARKIDVVMADTAGRLPTQLHLMEELRKVKRVIGKAQSDAPHEVLLVIDANTGQNALA
QVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPIPVYFIGVGEKVEDLQPFNAEEFADALLG

Nucleotide

• Length: 1158 bp

>NTDB_id=704056 NIX86_RS15900 WP_257813167.1 3387184..3388341(+) (pilA) [Burkholderia glumae strain BGR79S]
ATGTTCAGCTTCTTCAAACGATTGATCGGCTCGAAGGCCGACGACGCGCCGGCGGCCGACGAGCAAGCCAGCGCGGCTCA
CGCGCCGGACGCGGCCGGGCATGCCGCCGCCGCGGCGAGCCGGCCGGCGCCCGCGCCGGCACACGACGCCGAACCCGCCG
CCAGCCCGGCTGCACCGGTGCCGGCCGCCCCCGCCCCTGCGGCCGTGCCCGCCGCCCCCGCCGTCGAAGTCGTGCCGCCG
CCCGCGCCTGAGCCGGCCGCGAAAAAATCCTGGATTGCACGACTACGCTCCGGGCTCTCGAAGACGAGCACGAGCCTCAC
CAACGTGTTCGTCAATACCAGGATCGACGACGAACTCTACGAGGAGCTCGAAGCCGCGCTGCTGATGTCCGATGCCGGCA
TCGACGCGACCGAATACCTGCTCGGCGCGCTGCGCGAGAAGGTGCGCGCCGAACGCCTGAGCGATCCGCTGCAGGTGAAG
GCCGCGCTGCGCGCGCTGCTCGTCGACCTGCTCGCGCCGCTCGAGAAATCGCTGATGCTGGGCCGCGCCCAGCCGCTCGT
GATGATGATCGCGGGCGTCAACGGAGCCGGCAAGACCACCAGCATCGGTAAGCTCGCCAAGCACCTGCAGCGCTTCGACC
AATCGGTGCTGCTGGCCGCCGGCGACACGTTCCGCGCGGCCGCGCGCGAGCAGCTCGCGATCTGGGGCGAGCGCAACAAC
GTGACCGTGGTGCAGCAGGAAAGCGGCGATCCGGCTGCCGTGATATTCGATGCGGTCGGCGCCGCGCGCGCGCGCAAGAT
CGACGTGGTGATGGCCGACACCGCGGGCCGGTTGCCCACGCAGTTGCACCTGATGGAGGAACTGCGCAAGGTCAAGCGCG
TGATCGGCAAGGCGCAGAGCGACGCGCCGCACGAGGTGCTGCTCGTGATCGACGCCAATACCGGCCAGAACGCGCTCGCC
CAGGTGAAGGCATTCGACGACGCGCTGGGCCTGACCGGGCTCATCGTCACCAAGCTCGACGGCACCGCGAAGGGCGGCAT
TCTCGCCGCGATCGCGCGGCAGCGGCCGATACCCGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGGACTTGCAGCCGT
TCAACGCCGAGGAATTCGCCGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (104-164)

• SRP54-type protein, GTPase domain (SRP54) (186-385)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.3	100	0.564