Detailed information NTG0704043

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NIX80_RS15040
• Genome accession: NZ_CP100256
• Coordinates: 3258495..3259664 (+)
• Length: 389 a.a.
• NCBI ID: WP_015877057.1
• Uniprot ID: A0AAQ0BUH7
• Organism: Burkholderia glumae strain BGR76S
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3253495..3264664

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NIX80_RS15015	hisC	3253925..3254992 (+)	1068	WP_035983605.1	histidinol-phosphate transaminase	-
NIX80_RS15020	-	3255056..3255325 (-)	270	WP_015877053.1	YfhL family 4Fe-4S dicluster ferredoxin	-
NIX80_RS15025	-	3255615..3256937 (+)	1323	WP_015877054.1	TIGR00366 family protein	-
NIX80_RS15030	coaD	3257082..3257582 (-)	501	WP_015877055.1	pantetheine-phosphate adenylyltransferase	-
NIX80_RS15035	rsmD	3257693..3258307 (-)	615	WP_035983602.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
NIX80_RS15040	pilA	3258495..3259664 (+)	1170	WP_015877057.1	signal recognition particle-docking protein FtsY	Machinery gene
NIX80_RS15045	ybiB	3260234..3261211 (+)	978	WP_015877058.1	DNA-binding protein YbiB	-
NIX80_RS15050	leuA	3261625..3263274 (+)	1650	WP_015877059.1	2-isopropylmalate synthase	-
NIX80_RS15055	-	3263471..3263857 (-)	387	WP_015877060.1	nuclear transport factor 2 family protein	-
NIX80_RS15060	-	3263897..3264466 (-)	570	WP_015877061.1	acyloxyacyl hydrolase	-

Sequence

Protein

• Length: 389 a.a.
• Molecular weight: 40622.57 Da
• Isoelectric Point: 5.4803

>NTDB_id=704043 NIX80_RS15040 WP_015877057.1 3258495..3259664(+) (pilA) [Burkholderia glumae strain BGR76S]
MFSFFKRLIGSKADDASQDAPAADEQASAAHAPDAAGHAAAAASRPAPAPAHDAEPAASPAAPVPAAPAPAAVPAAPAVE
VVPPPAPEPAAKKSWIARLRSGLSKTSTSLTNVFVNTRIDDELYEELEAALLMSDAGIDATEYLLGALREKVRAERLSDP
LQVKAALRALLVDLLAPLEKSLMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQRFDQSVLLAAGDTFRAAAREQLAIWG
ERNNVTVVQQESGDPAAVIFDAVGAARARKIDVVMADTAGRLPTQLHLMEELRKVKRVIGKAQSDAPHEVLLVIDANTGQ
NALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPIPVYFIGVGEKVEDLQPFNAEEFADALLG

Nucleotide

• Length: 1170 bp

>NTDB_id=704043 NIX80_RS15040 WP_015877057.1 3258495..3259664(+) (pilA) [Burkholderia glumae strain BGR76S]
ATGTTCAGCTTCTTCAAACGATTGATCGGCTCGAAGGCCGACGACGCGTCGCAGGACGCGCCGGCGGCCGACGAGCAAGC
CAGCGCGGCTCACGCGCCGGACGCGGCCGGGCATGCCGCCGCCGCGGCGAGCCGGCCGGCGCCCGCGCCGGCACACGACG
CCGAACCCGCCGCCAGCCCGGCTGCACCGGTGCCGGCCGCCCCCGCCCCTGCGGCCGTGCCCGCCGCCCCCGCCGTCGAA
GTCGTGCCGCCGCCCGCGCCTGAGCCGGCCGCGAAAAAATCCTGGATCGCACGACTACGCTCCGGGCTCTCGAAGACGAG
CACGAGCCTCACCAACGTGTTCGTCAATACCAGGATCGACGACGAACTCTACGAGGAGCTCGAAGCCGCGCTGCTGATGT
CCGATGCCGGCATCGACGCGACCGAATACCTGCTCGGCGCGCTGCGCGAGAAGGTGCGCGCCGAACGCCTGAGCGATCCG
CTGCAGGTGAAGGCCGCGCTGCGCGCGCTGCTCGTCGACCTGCTCGCGCCGCTCGAGAAATCGCTGATGCTGGGCCGCGC
CCAGCCGCTCGTGATGATGATCGCGGGCGTCAACGGAGCCGGCAAGACCACCAGCATCGGTAAGCTCGCCAAACACCTGC
AGCGCTTCGACCAATCGGTGCTGCTGGCCGCCGGCGACACGTTCCGCGCGGCCGCGCGCGAGCAGCTCGCGATCTGGGGC
GAGCGCAACAACGTGACCGTGGTGCAGCAGGAAAGCGGCGATCCGGCCGCCGTGATATTCGATGCGGTCGGCGCCGCGCG
CGCGCGCAAGATCGACGTGGTGATGGCCGACACCGCGGGCCGGTTGCCCACGCAGTTGCACCTGATGGAGGAACTGCGCA
AGGTCAAGCGCGTGATCGGCAAGGCGCAGAGCGACGCGCCGCACGAGGTGCTGCTCGTGATCGACGCCAATACCGGCCAG
AACGCGCTCGCCCAGGTGAAGGCATTCGACGACGCGCTGGGCCTGACCGGGCTCATCGTCACCAAGCTCGACGGCACCGC
GAAGGGCGGCATTCTCGCCGCGATCGCGCGGCAGCGGCCGATACCCGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGG
ACTTGCAGCCGTTCAACGCCGAGGAATTCGCCGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (108-168)

• SRP54-type protein, GTPase domain (SRP54) (190-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50.82	100	0.558