Detailed information NTG0704039

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PCS82_RS17090
• Genome accession: NZ_CP115376
• Coordinates: 3538604..3539629 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain CUVET20-PYO4
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3533604..3544629

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PCS82_RS17060 (PCS82_17025)	zapB	3533688..3533933 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
PCS82_RS17065 (PCS82_17030)	rraA	3534018..3534503 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
PCS82_RS17070 (PCS82_17035)	menA	3534596..3535522 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PCS82_RS17075 (PCS82_17040)	hslU	3535589..3536920 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
PCS82_RS17080 (PCS82_17045)	hslV	3536930..3537460 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
PCS82_RS17085 (PCS82_17050)	ftsN	3537553..3538512 (-)	960	WP_000068834.1	cell division protein FtsN	-
PCS82_RS17090 (PCS82_17055)	cytR	3538604..3539629 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
PCS82_RS17095 (PCS82_17060)	priA	3539785..3541983 (-)	2199	WP_022646377.1	primosomal protein N'	Machinery gene
PCS82_RS17100 (PCS82_17065)	rpmE	3542186..3542398 (+)	213	WP_000710769.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=704039 PCS82_RS17090 WP_000644904.1 3538604..3539629(-) (cytR) [Escherichia coli strain CUVET20-PYO4]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=704039 PCS82_RS17090 WP_000644904.1 3538604..3539629(-) (cytR) [Escherichia coli strain CUVET20-PYO4]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACCGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628