Detailed information NTG0704029

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NIX82_RS15590
• Genome accession: NZ_CP100250
• Coordinates: 3348977..3350146 (+)
• Length: 389 a.a.
• NCBI ID: WP_015877057.1
• Uniprot ID: A0AAQ0BUH7
• Organism: Burkholderia glumae strain BGR35S
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3343977..3355146

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NIX82_RS15565	hisC	3344407..3345474 (+)	1068	WP_035983605.1	histidinol-phosphate transaminase	-
NIX82_RS15570	-	3345538..3345807 (-)	270	WP_015877053.1	YfhL family 4Fe-4S dicluster ferredoxin	-
NIX82_RS15575	-	3346097..3347419 (+)	1323	WP_015877054.1	TIGR00366 family protein	-
NIX82_RS15580	coaD	3347564..3348064 (-)	501	WP_015877055.1	pantetheine-phosphate adenylyltransferase	-
NIX82_RS15585	rsmD	3348175..3348789 (-)	615	WP_035983602.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
NIX82_RS15590	pilA	3348977..3350146 (+)	1170	WP_015877057.1	signal recognition particle-docking protein FtsY	Machinery gene
NIX82_RS15595	ybiB	3350716..3351693 (+)	978	WP_015877058.1	DNA-binding protein YbiB	-
NIX82_RS15600	leuA	3352107..3353756 (+)	1650	WP_015877059.1	2-isopropylmalate synthase	-
NIX82_RS15605	-	3353953..3354339 (-)	387	WP_015877060.1	nuclear transport factor 2 family protein	-
NIX82_RS15610	-	3354378..3354947 (-)	570	WP_015877061.1	acyloxyacyl hydrolase	-

Sequence

Protein

• Length: 389 a.a.
• Molecular weight: 40622.57 Da
• Isoelectric Point: 5.4803

>NTDB_id=704029 NIX82_RS15590 WP_015877057.1 3348977..3350146(+) (pilA) [Burkholderia glumae strain BGR35S]
MFSFFKRLIGSKADDASQDAPAADEQASAAHAPDAAGHAAAAASRPAPAPAHDAEPAASPAAPVPAAPAPAAVPAAPAVE
VVPPPAPEPAAKKSWIARLRSGLSKTSTSLTNVFVNTRIDDELYEELEAALLMSDAGIDATEYLLGALREKVRAERLSDP
LQVKAALRALLVDLLAPLEKSLMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQRFDQSVLLAAGDTFRAAAREQLAIWG
ERNNVTVVQQESGDPAAVIFDAVGAARARKIDVVMADTAGRLPTQLHLMEELRKVKRVIGKAQSDAPHEVLLVIDANTGQ
NALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPIPVYFIGVGEKVEDLQPFNAEEFADALLG

Nucleotide

• Length: 1170 bp

>NTDB_id=704029 NIX82_RS15590 WP_015877057.1 3348977..3350146(+) (pilA) [Burkholderia glumae strain BGR35S]
ATGTTCAGCTTCTTCAAACGATTGATCGGCTCGAAGGCCGACGACGCGTCGCAGGACGCGCCGGCGGCCGACGAGCAAGC
CAGCGCGGCTCACGCGCCGGACGCGGCCGGGCATGCCGCCGCCGCGGCGAGCCGGCCGGCGCCCGCGCCGGCACACGACG
CCGAACCCGCCGCCAGCCCGGCTGCACCGGTGCCGGCCGCCCCCGCCCCTGCGGCCGTGCCCGCCGCCCCCGCCGTCGAA
GTCGTGCCGCCGCCCGCGCCTGAGCCGGCCGCGAAAAAATCCTGGATCGCACGACTACGCTCCGGGCTCTCGAAGACGAG
CACGAGCCTCACCAACGTGTTCGTCAATACCAGGATCGACGACGAACTCTACGAGGAGCTCGAAGCCGCGCTGCTGATGT
CCGATGCCGGCATCGACGCGACCGAATACCTGCTCGGCGCGCTGCGCGAGAAGGTGCGCGCCGAACGCCTGAGCGATCCG
CTGCAGGTGAAGGCCGCGCTGCGCGCGCTGCTCGTCGACCTGCTCGCGCCGCTCGAGAAATCGCTGATGCTGGGCCGCGC
CCAGCCGCTCGTGATGATGATCGCGGGCGTCAACGGAGCCGGCAAGACCACCAGCATCGGTAAGCTCGCCAAACACCTGC
AGCGCTTCGACCAATCGGTGCTGCTGGCCGCCGGCGACACGTTCCGCGCGGCCGCGCGCGAGCAGCTCGCGATCTGGGGC
GAGCGCAACAACGTGACCGTGGTGCAGCAGGAAAGCGGCGATCCGGCCGCCGTGATATTCGATGCGGTCGGCGCCGCGCG
CGCGCGCAAGATCGACGTGGTGATGGCCGACACCGCGGGCCGGTTGCCCACGCAGTTGCACCTGATGGAGGAACTGCGCA
AGGTCAAGCGCGTGATCGGCAAGGCGCAGAGCGACGCGCCGCACGAGGTGCTGCTCGTGATCGACGCCAATACCGGCCAG
AACGCGCTCGCCCAGGTGAAGGCATTCGACGACGCGCTGGGCCTGACCGGGCTCATCGTCACCAAGCTCGACGGCACCGC
GAAGGGCGGCATTCTCGCCGCGATCGCGCGGCAGCGGCCGATACCCGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGG
ACTTGCAGCCGTTCAACGCCGAGGAATTCGCCGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (108-168)

• SRP54-type protein, GTPase domain (SRP54) (190-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50.82	100	0.558