Detailed information NTG0704015

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NIX71_RS16165
• Genome accession: NZ_CP100244
• Coordinates: 3443371..3444540 (+)
• Length: 389 a.a.
• NCBI ID: WP_015877057.1
• Uniprot ID: A0AAQ0BUH7
• Organism: Burkholderia glumae strain BGR28S
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3438371..3449540

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NIX71_RS16140	hisC	3438801..3439868 (+)	1068	WP_035983605.1	histidinol-phosphate transaminase	-
NIX71_RS16145	-	3439932..3440201 (-)	270	WP_015877053.1	YfhL family 4Fe-4S dicluster ferredoxin	-
NIX71_RS16150	-	3440491..3441813 (+)	1323	WP_015877054.1	TIGR00366 family protein	-
NIX71_RS16155	coaD	3441958..3442458 (-)	501	WP_015877055.1	pantetheine-phosphate adenylyltransferase	-
NIX71_RS16160	rsmD	3442569..3443183 (-)	615	WP_035983602.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
NIX71_RS16165	pilA	3443371..3444540 (+)	1170	WP_015877057.1	signal recognition particle-docking protein FtsY	Machinery gene
NIX71_RS16170	ybiB	3445110..3446087 (+)	978	WP_015877058.1	DNA-binding protein YbiB	-
NIX71_RS16175	leuA	3446501..3448150 (+)	1650	WP_015877059.1	2-isopropylmalate synthase	-
NIX71_RS16180	-	3448347..3448733 (-)	387	WP_015877060.1	nuclear transport factor 2 family protein	-
NIX71_RS16185	-	3448773..3449342 (-)	570	WP_015877061.1	acyloxyacyl hydrolase	-

Sequence

Protein

• Length: 389 a.a.
• Molecular weight: 40622.57 Da
• Isoelectric Point: 5.4803

>NTDB_id=704015 NIX71_RS16165 WP_015877057.1 3443371..3444540(+) (pilA) [Burkholderia glumae strain BGR28S]
MFSFFKRLIGSKADDASQDAPAADEQASAAHAPDAAGHAAAAASRPAPAPAHDAEPAASPAAPVPAAPAPAAVPAAPAVE
VVPPPAPEPAAKKSWIARLRSGLSKTSTSLTNVFVNTRIDDELYEELEAALLMSDAGIDATEYLLGALREKVRAERLSDP
LQVKAALRALLVDLLAPLEKSLMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQRFDQSVLLAAGDTFRAAAREQLAIWG
ERNNVTVVQQESGDPAAVIFDAVGAARARKIDVVMADTAGRLPTQLHLMEELRKVKRVIGKAQSDAPHEVLLVIDANTGQ
NALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPIPVYFIGVGEKVEDLQPFNAEEFADALLG

Nucleotide

• Length: 1170 bp

>NTDB_id=704015 NIX71_RS16165 WP_015877057.1 3443371..3444540(+) (pilA) [Burkholderia glumae strain BGR28S]
ATGTTCAGCTTCTTCAAACGATTGATCGGCTCGAAGGCCGACGACGCGTCGCAGGACGCGCCGGCGGCCGACGAGCAAGC
CAGCGCGGCTCACGCGCCGGACGCGGCCGGGCATGCCGCCGCCGCGGCGAGCCGGCCGGCGCCCGCGCCGGCACACGACG
CCGAACCCGCCGCCAGCCCGGCTGCACCGGTGCCGGCCGCCCCCGCCCCTGCGGCCGTGCCCGCCGCCCCCGCCGTCGAA
GTCGTGCCGCCGCCCGCGCCTGAGCCGGCCGCGAAAAAATCCTGGATCGCACGACTACGCTCCGGGCTCTCGAAGACGAG
CACGAGCCTCACCAACGTGTTCGTCAATACCAGGATCGACGACGAACTCTACGAGGAGCTCGAAGCCGCGCTGCTGATGT
CCGATGCCGGCATCGACGCGACCGAATACCTGCTCGGCGCGCTGCGCGAGAAGGTGCGCGCCGAACGCCTGAGCGATCCG
CTGCAGGTGAAGGCCGCGCTGCGCGCGCTGCTCGTCGACCTGCTCGCGCCGCTCGAGAAATCGCTGATGCTGGGCCGCGC
CCAGCCGCTCGTGATGATGATCGCGGGCGTCAACGGAGCCGGCAAGACCACCAGCATCGGTAAGCTCGCCAAACACCTGC
AGCGCTTCGACCAATCGGTGCTGCTGGCCGCCGGCGACACGTTCCGCGCGGCCGCGCGCGAGCAGCTCGCGATCTGGGGC
GAGCGCAACAACGTGACCGTGGTGCAGCAGGAAAGCGGCGATCCGGCCGCCGTGATATTCGATGCGGTCGGCGCCGCGCG
CGCGCGCAAGATCGACGTGGTGATGGCCGACACCGCGGGCCGGTTGCCCACGCAGTTGCACCTGATGGAGGAACTGCGCA
AGGTCAAGCGCGTGATCGGCAAGGCGCAGAGCGACGCGCCGCACGAGGTGCTGCTCGTGATCGACGCCAATACCGGCCAG
AACGCGCTCGCCCAGGTGAAGGCATTCGACGACGCGCTGGGCCTGACCGGGCTCATCGTCACCAAGCTCGACGGCACCGC
GAAGGGCGGCATTCTCGCCGCGATCGCGCGGCAGCGGCCGATACCCGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGG
ACTTGCAGCCGTTCAACGCCGAGGAATTCGCCGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (108-168)

• SRP54-type protein, GTPase domain (SRP54) (190-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50.82	100	0.558