Detailed information NTG0703967

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PCS79_RS22825
• Genome accession: NZ_CP115370
• Coordinates: 4623773..4624798 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain CUVET17-972
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4618773..4629798

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PCS79_RS22805 (PCS79_22760)	-	4619120..4620100 (+)	981	WP_000399648.1	IS110-like element IS621 family transposase	-
PCS79_RS22810 (PCS79_22765)	yiiX	4620335..4620943 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
PCS79_RS22815 (PCS79_22770)	rpmE	4621004..4621216 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
PCS79_RS22820 (PCS79_22775)	priA	4621419..4623617 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
PCS79_RS22825 (PCS79_22780)	cytR	4623773..4624798 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
PCS79_RS22830 (PCS79_22785)	ftsN	4624890..4625849 (+)	960	WP_000068828.1	cell division protein FtsN	-
PCS79_RS22835 (PCS79_22790)	hslV	4625942..4626472 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
PCS79_RS22840 (PCS79_22795)	hslU	4626482..4627813 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
PCS79_RS22845 (PCS79_22800)	menA	4627880..4628806 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PCS79_RS22850 (PCS79_22805)	rraA	4628899..4629384 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
PCS79_RS22855 (PCS79_22810)	zapB	4629469..4629714 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=703967 PCS79_RS22825 WP_000644904.1 4623773..4624798(+) (cytR) [Escherichia coli strain CUVET17-972]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=703967 PCS79_RS22825 WP_000644904.1 4623773..4624798(+) (cytR) [Escherichia coli strain CUVET17-972]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628