Detailed information NTG0703885

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PCS91_RS20840
• Genome accession: NZ_CP115365
• Coordinates: 4317028..4318053 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain CUVET19-1426
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4312028..4323053

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PCS91_RS20815 (PCS91_20785)	metJ	4312465..4312782 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
PCS91_RS20820 (PCS91_20790)	yiiX	4312966..4313574 (+)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
PCS91_RS20825 (PCS91_20795)	-	4313581..4314204 (+)	624	WP_000720774.1	TIGR02117 family protein	-
PCS91_RS20830 (PCS91_20800)	rpmE	4314259..4314471 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
PCS91_RS20835 (PCS91_20805)	priA	4314674..4316872 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
PCS91_RS20840 (PCS91_20810)	cytR	4317028..4318053 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
PCS91_RS20845 (PCS91_20815)	ftsN	4318145..4319104 (+)	960	WP_000068828.1	cell division protein FtsN	-
PCS91_RS20850 (PCS91_20820)	hslV	4319197..4319727 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
PCS91_RS20855 (PCS91_20825)	hslU	4319737..4321068 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
PCS91_RS20860 (PCS91_20830)	menA	4321135..4322061 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PCS91_RS20865 (PCS91_20835)	rraA	4322154..4322639 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
PCS91_RS20870 (PCS91_20840)	zapB	4322724..4322969 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=703885 PCS91_RS20840 WP_000644904.1 4317028..4318053(+) (cytR) [Escherichia coli strain CUVET19-1426]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=703885 PCS91_RS20840 WP_000644904.1 4317028..4318053(+) (cytR) [Escherichia coli strain CUVET19-1426]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628