Detailed information NTG0703703

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NKT35_RS04855
• Genome accession: NZ_CP100128
• Coordinates: 1042613..1043791 (+)
• Length: 392 a.a.
• NCBI ID: WP_254299360.1
• Uniprot ID: -
• Organism: Chromobacterium sp. IIBBL 290-4
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1037613..1048791

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NKT35_RS04805 (NKT35_04805)	rplK	1038203..1038634 (-)	432	WP_021479134.1	50S ribosomal protein L11	-
NKT35_RS04810 (NKT35_04810)	nusG	1038735..1039268 (-)	534	WP_254299354.1	transcription termination/antitermination protein NusG	-
NKT35_RS04815 (NKT35_04815)	secE	1039268..1039624 (-)	357	WP_254299356.1	preprotein translocase subunit SecE	-
NKT35_RS04825 (NKT35_04825)	tuf	1039775..1040965 (-)	1191	WP_254299344.1	elongation factor Tu	-
NKT35_RS04845 (NKT35_04845)	-	1041460..1041711 (-)	252	WP_254299357.1	YfhL family 4Fe-4S dicluster ferredoxin	-
NKT35_RS04850 (NKT35_04850)	rsmD	1041821..1042375 (-)	555	WP_254299358.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
NKT35_RS04855 (NKT35_04855)	pilA	1042613..1043791 (+)	1179	WP_254299360.1	signal recognition particle-docking protein FtsY	Machinery gene
NKT35_RS04860 (NKT35_04860)	ftsE	1043850..1044503 (+)	654	WP_254299363.1	cell division ATP-binding protein FtsE	-
NKT35_RS04865 (NKT35_04865)	ftsX	1044500..1045408 (+)	909	WP_254299365.1	permease-like cell division protein FtsX	-
NKT35_RS04870 (NKT35_04870)	rpoH	1045538..1046401 (+)	864	WP_254299367.1	RNA polymerase sigma factor RpoH	-
NKT35_RS04875 (NKT35_04875)	-	1046488..1048272 (-)	1785	WP_254299369.1	PglL family O-oligosaccharyltransferase	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 41487.82 Da
• Isoelectric Point: 5.1879

>NTDB_id=703703 NKT35_RS04855 WP_254299360.1 1042613..1043791(+) (pilA) [Chromobacterium sp. IIBBL 290-4]
MFSFFKKKPKPVETPQIETPALTTPAEEAPQAAAASPVLETAPEALPAAVETAPAIQHQAVEPQNTPAPAAALEAIEPPP
AAPVEATPLKKLSWTERLKAGLAKTRDKLGKQLAGLFGGGKIDEDLYEELETVLLTSDMGVDATVHLLGDVRERVSLKGL
KDASELKGALKDSLQDLIGPLEVPLNVEGKKPFVIMMTGVNGAGKTTSIGKLAKYYQSQGKSVLLAAGDTFRAAAREQLI
AWGERNGVTVIAQQGGDSAAVCYDAIQAAIARGIDIVLADTAGRLPTQLHLMEEIKKVKRVIQKALPDAPHEVVLVLDAN
IGQNTVNQVKAFDDALGLTGLILTKLDGTAKGGVIAAIAKQRPIPLRFIGVGESIDDLRPFSSRDYIDALFE

Nucleotide

• Length: 1179 bp

>NTDB_id=703703 NKT35_RS04855 WP_254299360.1 1042613..1043791(+) (pilA) [Chromobacterium sp. IIBBL 290-4]
ATGTTTAGCTTCTTCAAGAAAAAACCCAAGCCGGTGGAGACGCCGCAAATCGAGACGCCCGCGCTAACCACCCCCGCGGA
GGAAGCGCCGCAAGCCGCAGCTGCCAGCCCTGTTTTGGAGACCGCTCCCGAGGCCCTGCCCGCGGCGGTTGAAACCGCGC
CCGCCATCCAGCACCAAGCAGTCGAACCTCAGAATACTCCCGCGCCCGCAGCCGCGCTTGAAGCCATCGAACCGCCGCCC
GCCGCGCCCGTCGAAGCCACGCCGCTGAAAAAGCTGAGCTGGACCGAACGCCTGAAAGCCGGCCTGGCCAAAACCCGCGA
CAAGCTGGGCAAGCAGCTGGCTGGTTTATTCGGCGGCGGCAAGATAGACGAAGACCTGTACGAAGAACTGGAGACGGTGC
TGCTGACGTCCGACATGGGCGTGGACGCCACCGTTCATTTGCTGGGCGACGTGCGCGAGCGCGTGTCCTTGAAGGGGCTG
AAGGACGCGTCGGAATTGAAAGGCGCGCTGAAGGACTCGCTGCAGGATCTGATCGGCCCGCTGGAAGTGCCGCTCAATGT
GGAAGGCAAGAAGCCTTTCGTGATCATGATGACCGGCGTCAACGGCGCCGGCAAGACCACCTCCATCGGCAAGCTGGCCA
AGTACTACCAGAGCCAGGGCAAGAGCGTGCTGCTGGCCGCCGGCGACACTTTCCGCGCCGCCGCGCGCGAACAGCTGATC
GCCTGGGGCGAGCGCAACGGCGTGACCGTCATCGCCCAGCAAGGCGGCGATTCCGCCGCTGTTTGCTATGACGCCATCCA
GGCCGCCATCGCCCGCGGCATCGACATCGTGCTGGCCGATACCGCCGGCCGCCTGCCGACTCAGCTGCACCTGATGGAAG
AAATCAAGAAGGTGAAGCGCGTGATCCAGAAGGCGCTGCCGGACGCCCCGCACGAGGTGGTGCTGGTGCTGGACGCCAAT
ATCGGCCAGAACACCGTCAACCAGGTCAAGGCCTTCGACGACGCGCTGGGCCTGACCGGCCTGATCCTGACCAAGCTGGA
CGGCACCGCCAAGGGCGGCGTGATCGCCGCCATCGCCAAGCAGCGCCCGATTCCACTGCGCTTCATCGGCGTGGGCGAAA
GCATAGACGACCTGCGCCCGTTCAGCAGCCGCGACTACATCGACGCGCTGTTCGAATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (192-391)

• SRP54-type protein, helical bundle domain (SRP54_N) (109-174)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	62.919	100	0.671