Detailed information NTG0703549

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: PCS86_RS19860
• Genome accession: NZ_CP115343
• Coordinates: 4055331..4056536 (+)
• Length: 401 a.a.
• NCBI ID: WP_001161835.1
• Uniprot ID: -
• Organism: Escherichia coli strain CUVET21-H2
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 4050331..4061536

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PCS86_RS19845 (PCS86_19780)	-	4050846..4052522 (+)	1677	WP_001298258.1	polysaccharide biosynthesis/export family protein	-
PCS86_RS19850 (PCS86_19785)	kdsB	4052532..4053272 (+)	741	WP_000030745.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PCS86_RS19855 (PCS86_19790)	-	4053269..4055296 (+)	2028	WP_000579517.1	capsular polysaccharide biosynthesis protein	-
PCS86_RS19860 (PCS86_19795)	kpsS	4055331..4056536 (+)	1206	WP_001161835.1	capsule biosynthesis protein	Regulator
PCS86_RS19865 (PCS86_19800)	-	4056686..4057915 (-)	1230	WP_000575410.1	alpha-2,8-polysialyltransferase family protein	-
PCS86_RS19870 (PCS86_19805)	-	4057905..4059053 (-)	1149	WP_024188362.1	DUF6716 putative glycosyltransferase	-
PCS86_RS19875 (PCS86_19810)	neuC	4059046..4060221 (-)	1176	WP_000723250.1	UDP-N-acetylglucosamine 2-epimerase	-
PCS86_RS19880 (PCS86_19815)	-	4060218..4061474 (-)	1257	WP_001259305.1	cytidylyltransferase domain-containing protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47858.21 Da
• Isoelectric Point: 10.0398

>NTDB_id=703549 PCS86_RS19860 WP_001161835.1 4055331..4056536(+) (kpsS) [Escherichia coli strain CUVET21-H2]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNWVYYGGNTTNCQHNI
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=703549 PCS86_RS19860 WP_001161835.1 4055331..4056536(+) (kpsS) [Escherichia coli strain CUVET21-H2]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGACGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTCCCCGGATGGTTACGGGATCTCCACCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGTTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAAGAAGGATATTTACGTCCGCAGTTTATTACTGTTGAAGAAGGCGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGTTGGCATTACCGTCATGAGTTCCCTCGCTACCGCCACCACAA
ATCGTTTTCCCCCTGGTATGAGGCTCGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTGCCGAGGTTAATGAACGAGCTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCACCGAAAGA
AAGTTATTTGGTGATCAAGCACCATCCAATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGCTAAGTAAGG
AATATGGCTTAGGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACGCAGGTTAATTGGGTTTATTATGGGGGGAACACAACAAACTGCCAACATAATATA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.846	97.007	0.387