Detailed information NTG0703491

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PCS86_RS00270
• Genome accession: NZ_CP115343
• Coordinates: 47251..48276 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644911.1
• Uniprot ID: -
• Organism: Escherichia coli strain CUVET21-H2
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 42251..53276

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PCS86_RS00240 (PCS86_00240)	zapB	42335..42580 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
PCS86_RS00245 (PCS86_00245)	rraA	42665..43150 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
PCS86_RS00250 (PCS86_00250)	menA	43243..44169 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PCS86_RS00255 (PCS86_00255)	hslU	44236..45567 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
PCS86_RS00260 (PCS86_00260)	hslV	45577..46107 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
PCS86_RS00265 (PCS86_00265)	ftsN	46200..47159 (-)	960	WP_000068847.1	cell division protein FtsN	-
PCS86_RS00270 (PCS86_00270)	cytR	47251..48276 (-)	1026	WP_000644911.1	DNA-binding transcriptional regulator CytR	Regulator
PCS86_RS00275 (PCS86_00275)	priA	48432..50630 (-)	2199	WP_001540348.1	primosomal protein N'	Machinery gene
PCS86_RS00280 (PCS86_00280)	rpmE	50833..51045 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
PCS86_RS00285 (PCS86_00285)	yiiX	51106..51714 (-)	609	WP_000702298.1	YiiX family permuted papain-like enzyme	-
PCS86_RS00290 (PCS86_00290)	metJ	51774..52091 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37805.71 Da
• Isoelectric Point: 6.1617

>NTDB_id=703491 PCS86_RS00270 WP_000644911.1 47251..48276(-) (cytR) [Escherichia coli strain CUVET21-H2]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHNRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=703491 PCS86_RS00270 WP_000644911.1 47251..48276(-) (cytR) [Escherichia coli strain CUVET21-H2]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAATCGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625