Detailed information NTG0703296

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PCS80_RS14885
• Genome accession: NZ_CP115324
• Coordinates: 3023384..3024409 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain CUVET17-1136
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3018384..3029409

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PCS80_RS14855 (PCS80_14840)	zapB	3018468..3018713 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
PCS80_RS14860 (PCS80_14845)	rraA	3018798..3019283 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
PCS80_RS14865 (PCS80_14850)	menA	3019376..3020302 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PCS80_RS14870 (PCS80_14855)	hslU	3020369..3021700 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
PCS80_RS14875 (PCS80_14860)	hslV	3021710..3022240 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
PCS80_RS14880 (PCS80_14865)	ftsN	3022333..3023292 (-)	960	WP_000068834.1	cell division protein FtsN	-
PCS80_RS14885 (PCS80_14870)	cytR	3023384..3024409 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
PCS80_RS14890 (PCS80_14875)	priA	3024565..3026763 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
PCS80_RS14895 (PCS80_14880)	rpmE	3026966..3027178 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
PCS80_RS14900 (PCS80_14885)	yiiX	3027239..3027847 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
PCS80_RS14905 (PCS80_14890)	metJ	3027907..3028224 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=703296 PCS80_RS14885 WP_000644908.1 3023384..3024409(-) (cytR) [Escherichia coli strain CUVET17-1136]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=703296 PCS80_RS14885 WP_000644908.1 3023384..3024409(-) (cytR) [Escherichia coli strain CUVET17-1136]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625