Detailed information NTG0703258

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: NIH92_RS17590
• Genome accession: NZ_CP099989
• Coordinates: 3644776..3645477 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain KBN10P04593
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3639776..3650477

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NIH92_RS17560 (NIH92_17560)	-	3640082..3640525 (-)	444	WP_001246675.1	SRPBCC family protein	-
NIH92_RS17565 (NIH92_17565)	tadA	3640595..3641098 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
NIH92_RS17570 (NIH92_17570)	-	3641105..3642229 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
NIH92_RS17575 (NIH92_17575)	ung	3642226..3642939 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
NIH92_RS17580 (NIH92_17580)	-	3642990..3643586 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
NIH92_RS17585 (NIH92_17585)	gspK	3643817..3644776 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
NIH92_RS17590 (NIH92_17590)	xcpW	3644776..3645477 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
NIH92_RS17595 (NIH92_17595)	xcpV	3645477..3645857 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
NIH92_RS17600 (NIH92_17600)	-	3645847..3646401 (-)	555	WP_000841373.1	type II secretion system protein	-
NIH92_RS17605 (NIH92_17605)	-	3646411..3647019 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
NIH92_RS17610 (NIH92_17610)	-	3647057..3647830 (-)	774	WP_000497298.1	TatD family hydrolase	-
NIH92_RS17615 (NIH92_17615)	-	3647848..3648189 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
NIH92_RS17620 (NIH92_17620)	-	3648201..3649181 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
NIH92_RS17625 (NIH92_17625)	kdsB	3649193..3649954 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=703258 NIH92_RS17590 WP_000594589.1 3644776..3645477(-) (xcpW) [Acinetobacter baumannii strain KBN10P04593]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=703258 NIH92_RS17590 WP_000594589.1 3644776..3645477(-) (xcpW) [Acinetobacter baumannii strain KBN10P04593]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996