Detailed information NTG0703039

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: NG806_RS16355
• Genome accession: NZ_CP099966
• Coordinates: 3593625..3594734 (-)
• Length: 369 a.a.
• NCBI ID: WP_261510672.1
• Uniprot ID: -
• Organism: Chryseobacterium paludis strain CJ51
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 3588625..3599734

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NG806_RS16330	-	3589456..3589839 (-)	384	WP_261510664.1	group III truncated hemoglobin	-
NG806_RS16335	-	3589961..3590932 (+)	972	WP_261510666.1	ion channel	-
NG806_RS16340	-	3590932..3591420 (+)	489	WP_214830272.1	YkgJ family cysteine cluster protein	-
NG806_RS16345	-	3591540..3591860 (+)	321	WP_261510668.1	hypothetical protein	-
NG806_RS16350	gdhA	3592076..3593434 (-)	1359	WP_214830276.1	NADP-specific glutamate dehydrogenase	-
NG806_RS16355	dprA	3593625..3594734 (-)	1110	WP_261510672.1	DNA-processing protein DprA	Machinery gene
NG806_RS16360	-	3594768..3595535 (-)	768	WP_214830280.1	rhomboid family intramembrane serine protease	-
NG806_RS16365	-	3595783..3596715 (+)	933	WP_214830282.1	DUF3078 domain-containing protein	-
NG806_RS16370	sufD	3596785..3598092 (-)	1308	WP_214831311.1	Fe-S cluster assembly protein SufD	-
NG806_RS16375	sufC	3598212..3598955 (-)	744	WP_214830284.1	Fe-S cluster assembly ATPase SufC	-
NG806_RS16380	-	3598974..3599480 (-)	507	WP_214830291.1	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41161.38 Da
• Isoelectric Point: 8.3189

>NTDB_id=703039 NG806_RS16355 WP_261510672.1 3593625..3594734(-) (dprA) [Chryseobacterium paludis strain CJ51]
MISEEHLYAIALRECSLIGDINFIKLIRTFGSAKTAWEKAKKEYKKIDGFGQKIVSDIGNPSHLDFAEKELKFCESNNIL
IKLKHLKELPYLLGECEDAPAILYQKGNYKNSLLPLSIVGTRNITAYGKQFIKNFFEETQSCSFISISGLALGVDKEVHD
QSLHYKIPTAAVLAHGFHTLYPAKNKRLSEKILQDGGVLFTEFNSSRKPDRENFIQRNRIIAGISPATMVVETAFGGGSM
STATFANGYNRDVFALPGKITDQYSQGCNHLISQNKAATISTIKDLISNLGFNKPKEKIEELFPSSSIAIQLTENQSLIY
NFIAENPQINLDDLAQQIVLPTHRILPVLLELELLGKVKSFSGRQFLAI

Nucleotide

• Length: 1110 bp

>NTDB_id=703039 NG806_RS16355 WP_261510672.1 3593625..3594734(-) (dprA) [Chryseobacterium paludis strain CJ51]
ATGATTTCCGAAGAACATCTTTATGCAATCGCATTACGCGAGTGCAGCCTGATTGGTGATATCAATTTCATAAAACTTAT
TAGAACATTTGGAAGCGCTAAAACGGCGTGGGAAAAGGCTAAGAAAGAATATAAAAAAATAGATGGATTTGGTCAAAAGA
TTGTATCAGATATTGGCAACCCTAGCCATTTAGACTTTGCTGAAAAAGAATTGAAATTTTGCGAAAGCAACAATATTCTG
ATCAAGCTAAAACATCTTAAAGAACTCCCCTACTTACTCGGGGAATGTGAAGATGCTCCTGCTATTTTATACCAAAAAGG
AAACTACAAAAATTCACTACTGCCCTTAAGTATTGTAGGTACAAGGAATATTACGGCTTATGGTAAACAGTTTATAAAGA
ATTTTTTTGAAGAAACCCAATCTTGTAGTTTTATTTCCATTAGTGGATTGGCTTTGGGAGTAGATAAAGAAGTGCACGAT
CAATCTCTTCACTACAAAATCCCTACCGCTGCTGTTTTAGCGCATGGTTTCCACACTCTTTATCCTGCAAAAAATAAGCG
GCTATCTGAGAAGATCCTGCAAGACGGCGGAGTCCTGTTTACCGAATTTAATTCTTCAAGAAAACCTGATAGAGAAAACT
TTATTCAAAGAAATAGAATTATTGCTGGAATATCTCCAGCAACTATGGTAGTGGAGACCGCTTTTGGAGGCGGATCAATG
AGTACAGCAACCTTTGCTAACGGCTATAACAGGGATGTTTTTGCTCTGCCCGGAAAAATTACAGATCAGTATAGCCAAGG
CTGCAATCATCTTATTTCTCAAAATAAGGCAGCTACAATTTCTACAATTAAAGATCTGATTAGCAACCTTGGTTTTAACA
AACCTAAAGAAAAAATAGAAGAACTATTTCCCAGTTCTTCTATTGCAATCCAATTAACTGAAAATCAAAGTCTAATCTAT
AATTTTATTGCTGAAAATCCACAAATTAATTTGGATGATTTAGCCCAGCAAATAGTCCTTCCAACACATAGAATTTTACC
TGTACTTTTAGAATTAGAGCTTTTAGGTAAAGTGAAATCGTTTTCTGGGAGGCAATTTCTAGCAATTTGA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (310-363)

• DNA recombination-mediator protein A (DNA_processg_A) (77-279)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	53.297	98.645	0.526