Detailed information NTG0702971

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NKE59_RS09010
• Genome accession: NZ_CP099959
• Coordinates: 1780061..1780972 (+)
• Length: 303 a.a.
• NCBI ID: WP_353438657.1
• Uniprot ID: A0AAU8A245
• Organism: Polynucleobacter sp. UK-FUSCHL-C3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1775061..1785972

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NKE59_RS08980 (NKE59_08950)	pth	1775202..1775792 (+)	591	WP_353438649.1	aminoacyl-tRNA hydrolase	-
NKE59_RS08985 (NKE59_08955)	-	1775793..1776056 (-)	264	WP_353438651.1	YfhL family 4Fe-4S dicluster ferredoxin	-
NKE59_RS08990 (NKE59_08960)	coaD	1776095..1776586 (-)	492	WP_353438652.1	pantetheine-phosphate adenylyltransferase	-
NKE59_RS08995 (NKE59_08965)	rsmD	1776620..1777213 (-)	594	WP_353438654.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
NKE59_RS09000 (NKE59_08970)	-	1777214..1778566 (-)	1353	WP_353438655.1	pitrilysin family protein	-
NKE59_RS09005 (NKE59_08975)	-	1778573..1779940 (-)	1368	WP_353438656.1	pitrilysin family protein	-
NKE59_RS09010 (NKE59_08980)	pilA	1780061..1780972 (+)	912	WP_353438657.1	signal recognition particle-docking protein FtsY	Machinery gene
NKE59_RS09015 (NKE59_08985)	rpoH	1781059..1781991 (+)	933	WP_353439947.1	RNA polymerase sigma factor RpoH	-
NKE59_RS09020 (NKE59_08990)	-	1781992..1782564 (-)	573	WP_353438659.1	SCO family protein	-
NKE59_RS09025 (NKE59_08995)	cyoE	1782569..1783426 (-)	858	WP_353439949.1	heme o synthase	-
NKE59_RS09030 (NKE59_09000)	-	1783453..1784580 (-)	1128	WP_353438660.1	COX15/CtaA family protein	-
NKE59_RS09035 (NKE59_09005)	-	1784577..1785230 (-)	654	WP_353438661.1	hypothetical protein	-
NKE59_RS09040 (NKE59_09010)	-	1785246..1785968 (-)	723	WP_353438662.1	SURF1 family protein	-

Sequence

Protein

• Length: 303 a.a.
• Molecular weight: 32516.45 Da
• Isoelectric Point: 7.5160

>NTDB_id=702971 NKE59_RS09010 WP_353438657.1 1780061..1780972(+) (pilA) [Polynucleobacter sp. UK-FUSCHL-C3]
MFGLRKTLGSLFGLHPIDESWFEQLEETLLKADVGIATTNVLIASLRKLAKSHSIQNAEDLKGLLVQEISRLLAPLENPQ
NPLLLSQSNHKPEIWLIVGVNGAGKTTSIGKLCHHFQVQGKSVLLAAGDTFRAAARNQLKEWGERNQVQVLSQESGDAAA
VAHDAIHAAISRQIDVLFIDTAGRLATQGNLMEELKKVKRVISKVVPDAPHQIVLVLDGNTGQNGIAQVIAFRNAIGLQG
IIVTKLDGTAKGGVICALSKALETPPETGTTAFKTFVYALGKGEGLSDLEPFNAKAYAKELVE

Nucleotide

• Length: 912 bp

>NTDB_id=702971 NKE59_RS09010 WP_353438657.1 1780061..1780972(+) (pilA) [Polynucleobacter sp. UK-FUSCHL-C3]
ATGTTTGGTTTACGTAAAACGCTTGGTTCCCTATTTGGTCTTCATCCAATTGATGAGTCCTGGTTTGAGCAATTAGAAGA
AACCCTTCTAAAGGCAGATGTTGGGATTGCGACCACCAACGTACTTATTGCTAGCCTTCGTAAACTAGCTAAATCCCATT
CGATCCAAAATGCTGAGGATTTAAAAGGGTTATTGGTTCAGGAAATTAGCCGTCTTTTAGCTCCTCTTGAAAATCCTCAA
AACCCTCTTTTATTAAGCCAGTCAAACCACAAACCTGAAATCTGGCTAATCGTTGGGGTTAATGGTGCAGGTAAAACAAC
CTCTATCGGCAAACTTTGTCATCACTTTCAAGTGCAAGGTAAATCTGTTTTATTGGCTGCTGGCGATACCTTCAGAGCTG
CGGCGCGCAATCAACTCAAGGAATGGGGGGAGCGCAACCAAGTCCAAGTCTTAAGCCAAGAAAGTGGTGACGCGGCAGCC
GTTGCGCATGACGCTATACACGCTGCGATTTCTCGCCAAATCGATGTTCTGTTTATTGATACGGCTGGGCGCTTAGCGAC
CCAAGGAAATCTGATGGAAGAGCTCAAAAAGGTAAAACGGGTGATCTCCAAGGTGGTTCCAGATGCGCCCCATCAAATTG
TCCTCGTTCTGGATGGCAATACTGGTCAGAATGGCATTGCACAAGTTATAGCATTTAGGAATGCCATTGGTCTTCAGGGG
ATTATTGTCACCAAATTGGATGGTACTGCTAAGGGTGGCGTTATTTGTGCGCTTAGCAAAGCCCTTGAGACCCCCCCAGA
AACGGGCACCACCGCCTTCAAAACCTTTGTCTATGCCCTGGGTAAAGGGGAGGGTCTGTCTGATCTAGAGCCCTTTAATG
CAAAAGCATATGCTAAAGAGCTTGTAGAATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (93-302)

• SRP54-type protein, helical bundle domain (SRP54_N) (3-68)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49	99.01	0.485