Detailed information NTG0702655

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NI386_RS22165
• Genome accession: NZ_CP099924
• Coordinates: 2995525..2996532 (+)
• Length: 335 a.a.
• NCBI ID: WP_005481416.1
• Uniprot ID: A0A072GUT1
• Organism: Vibrio parahaemolyticus strain Isc7
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2990525..3001532

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NI386_RS22145 (NI386_22775)	rplC	2991059..2991688 (-)	630	WP_005456132.1	50S ribosomal protein L3	-
NI386_RS22150 (NI386_22780)	rpsJ	2991703..2992014 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
NI386_RS22155 (NI386_22785)	rpmE	2992472..2992693 (-)	222	WP_005457203.1	50S ribosomal protein L31	-
NI386_RS22160 (NI386_22790)	priA	2992988..2995192 (+)	2205	WP_308390417.1	primosomal protein N'	-
NI386_RS22165 (NI386_22795)	cytR	2995525..2996532 (+)	1008	WP_005481416.1	DNA-binding transcriptional regulator CytR	Regulator
NI386_RS22170 (NI386_22800)	ftsN	2996709..2997254 (+)	546	WP_005481405.1	cell division protein FtsN	-
NI386_RS22175 (NI386_22805)	hslV	2997418..2997969 (+)	552	WP_005489705.1	ATP-dependent protease subunit HslV	-
NI386_RS22180 (NI386_22810)	hslU	2997993..2999324 (+)	1332	WP_308390418.1	HslU--HslV peptidase ATPase subunit	-
NI386_RS22185 (NI386_22815)	-	2999509..3000426 (+)	918	WP_005457195.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NI386_RS22190 (NI386_22820)	rraA	3000503..3001015 (+)	513	WP_005457192.1	ribonuclease E activity regulator RraA	-
NI386_RS22195 (NI386_22825)	zapB	3001120..3001362 (-)	243	WP_005481417.1	cell division protein ZapB	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36835.35 Da
• Isoelectric Point: 6.4938

>NTDB_id=702655 NI386_RS22165 WP_005481416.1 2995525..2996532(+) (cytR) [Vibrio parahaemolyticus strain Isc7]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKDPQYSVITEFSFDGGAKAVRKLLELPEPPTA
IFCHCDTMAIGAIQEAKRLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPQRA

Nucleotide

• Length: 1008 bp

>NTDB_id=702655 NI386_RS22165 WP_005481416.1 2995525..2996532(+) (cytR) [Vibrio parahaemolyticus strain Isc7]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTCGACAGCTACGGTATCTCGAGCATTAATGAATCCAGAAAA
AGTCTCTTCTTCAACAAGAAAAAGAGTCGAAGATGCCGTGCTTGAAGCGGGCTATTCTCCAAATTCATTAGCGCGTAATC
TACGTAGAAACGAATCAAAAACGATTGTTACCATCGTTCCTGACATCTGTGATCCTTACTTTTCTGAAATCATTCGTGGT
ATCGAAGACGCCGCTATGGAACATGGCTACCTCGTACTGCTCGGTGACAGCGGCCAGCAGAAAAAGCGTGAAAGCTCATT
TGTGAATCTAGTGTTCACCAAACAAGCCGATGGCATGTTACTGCTTGGCACCGACCTGCCATTTGATGTCAGCAAGCCAG
AACAGAAAAACCTGCCACCAATGGTCATGGCTTGTGAGTTTGCGCCAGAGCTAGAATTACCAACCGTGCACATTGACAAC
CTAACGTCTGCTTTTGAAGCGGTCAATTACCTAACTCAACTTGGCCATAAACGCATAGCACAAATTTCAGGGCCAGACAC
AGCGGTATTGTGCCAGTTCCGCCAGCAAGGTTATCAACAAGCCTTGCGTCGCGCGGGGATCAGTAAAGACCCACAATACA
GTGTTATCACTGAGTTTTCTTTTGACGGCGGCGCGAAAGCTGTACGTAAGTTGCTAGAACTTCCAGAGCCACCAACTGCG
ATTTTCTGCCACTGTGACACCATGGCAATCGGCGCAATCCAAGAAGCGAAACGACTCGGTCTGCGCGTTCCGCAAGATCT
GTCAGTGGTTGGTTTCGATGATATCAACTTTGCTCAATACTGCGATCCACCGTTAACGACCATTTCTCAACCTCGTTATG
AAATTGGCCGCCAAGCGATGCTTATGATGCTTGAACTCCTTAAAGGCCATGACGTTCATTCAGGTTCACGCTTACTAGAA
ACTAAGCTTGTTGTCCGTGGTAGCGCAGCGCCACCGCAACGCGCCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A072GUT1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	100	100	1
cytR	Vibrio cholerae C6706	90.719	99.701	0.904