Detailed information
Bioinformatically predicted
Overview
| Name | luxP | Type | Regulator |
| Locus tag | NI388_RS21055 | Genome accession | NZ_CP099920 |
| Coordinates | 1212648..1213745 (+) | Length | 365 a.a. |
| NCBI ID | WP_005463467.1 | Uniprot ID | Q87GU4 |
| Organism | Vibrio parahaemolyticus strain Isc14B | ||
| Function | autoinducer sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1207648..1218745
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NI388_RS21025 (NI388_21655) | - | 1207785..1208762 (+) | 978 | WP_015313433.1 | Gfo/Idh/MocA family protein | - |
| NI388_RS21030 (NI388_21660) | - | 1208836..1210173 (-) | 1338 | WP_308391223.1 | MATE family efflux transporter | - |
| NI388_RS21035 (NI388_21665) | - | 1210296..1210610 (-) | 315 | WP_005453573.1 | DUF496 family protein | - |
| NI388_RS21040 (NI388_21670) | - | 1210937..1211152 (+) | 216 | WP_005477197.1 | hypothetical protein | - |
| NI388_RS21045 (NI388_21675) | - | 1211329..1211979 (+) | 651 | WP_308390907.1 | YceH family protein | - |
| NI388_RS21050 (NI388_21680) | - | 1211976..1212296 (+) | 321 | WP_308390908.1 | GIY-YIG nuclease family protein | - |
| NI388_RS21055 (NI388_21685) | luxP | 1212648..1213745 (+) | 1098 | WP_005463467.1 | autoinducer 2-binding periplasmic protein LuxP | Regulator |
| NI388_RS21060 (NI388_21690) | luxQ | 1213745..1216321 (+) | 2577 | WP_308390909.1 | quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ | - |
| NI388_RS21065 (NI388_21695) | - | 1216533..1216988 (+) | 456 | WP_005477342.1 | MarR family transcriptional regulator | - |
| NI388_RS21070 (NI388_21700) | - | 1217026..1218081 (+) | 1056 | WP_015313427.1 | HlyD family secretion protein | - |
Sequence
Protein
Download Length: 365 a.a. Molecular weight: 41339.67 Da Isoelectric Point: 5.0568
>NTDB_id=702573 NI388_RS21055 WP_005463467.1 1212648..1213745(+) (luxP) [Vibrio parahaemolyticus strain Isc14B]
MNKALVLSLISIAGMSPASQASQVLNGYWAYQEFLNEFPEQKHLTDALAAAVRDDPVPIAPEKRHPLKISVVYPGQQISD
YWIRNIDAFEKRLDKLNIDYQINQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSTKTKLILQNI
TTPVREWETRQPFMYVGFDHAEGSRELAVEFGKQFPKNTHYSVLYFSEGYISDIRGNTFIHQVNQDSQFELQSAYYTKAT
KQSGYEAAKASLKKYPDVEFIYACSTDVALGAVEALSELGREDVMINGWGGGSAELDAILKGELDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN
MNKALVLSLISIAGMSPASQASQVLNGYWAYQEFLNEFPEQKHLTDALAAAVRDDPVPIAPEKRHPLKISVVYPGQQISD
YWIRNIDAFEKRLDKLNIDYQINQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSTKTKLILQNI
TTPVREWETRQPFMYVGFDHAEGSRELAVEFGKQFPKNTHYSVLYFSEGYISDIRGNTFIHQVNQDSQFELQSAYYTKAT
KQSGYEAAKASLKKYPDVEFIYACSTDVALGAVEALSELGREDVMINGWGGGSAELDAILKGELDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN
Nucleotide
Download Length: 1098 bp
>NTDB_id=702573 NI388_RS21055 WP_005463467.1 1212648..1213745(+) (luxP) [Vibrio parahaemolyticus strain Isc14B]
ATGAATAAAGCGTTAGTATTGTCCCTGATTTCAATTGCCGGCATGTCTCCGGCTTCACAAGCCTCTCAGGTTCTTAACGG
CTACTGGGCGTATCAAGAATTCTTAAATGAATTTCCAGAACAGAAACACTTAACGGATGCTCTGGCTGCGGCCGTGAGAG
ACGATCCTGTGCCTATTGCCCCTGAAAAAAGACACCCATTAAAAATCTCCGTTGTTTATCCAGGGCAGCAGATTTCCGAT
TACTGGATAAGAAACATCGACGCGTTTGAGAAGCGCTTAGATAAACTCAATATTGATTACCAAATCAATCAAGTGTTTAC
GCGACCAAACGCCGATATCAAACAACAAAGCCTTTCTTTGATGGAAGCACTGAAAAGCAATTCCGACTACTTAATTTTTA
CACTCGATACGACCCGACATCGTAAGTTTGTCGAACATGTTTTAGATTCCACCAAAACCAAACTTATCCTGCAAAATATC
ACGACGCCAGTCCGTGAATGGGAAACTCGACAGCCTTTTATGTACGTCGGTTTCGATCACGCTGAAGGCAGTCGTGAACT
CGCTGTGGAGTTTGGCAAGCAGTTCCCGAAAAATACCCATTACAGCGTTTTGTACTTCTCTGAAGGCTACATTAGCGATA
TCCGTGGTAACACATTCATTCACCAAGTGAACCAAGACAGTCAGTTTGAACTACAATCTGCTTACTATACAAAAGCGACA
AAACAGTCTGGGTATGAAGCTGCAAAAGCCAGTTTGAAAAAATACCCAGATGTCGAGTTCATTTATGCTTGTTCAACCGA
CGTCGCGTTAGGTGCCGTCGAAGCACTTTCTGAACTTGGCCGTGAAGACGTAATGATTAATGGCTGGGGCGGTGGTTCTG
CTGAGCTAGACGCTATCTTAAAAGGGGAGTTAGATATCACCGTCATGCGTATGAATGATGATACTGGCATTGCGATGGCA
GAGGCGATCAAATGGGATTTGGAAGGTAAACCTGTACCAACGGTGTACTCTGGGGACTTCGAAGTTGTGACTAAATCAGA
TTCCCCTGAGCGAATTGAAGCTCTCAGAAAACGTGCATTTAGATACTCAGACAATTGA
ATGAATAAAGCGTTAGTATTGTCCCTGATTTCAATTGCCGGCATGTCTCCGGCTTCACAAGCCTCTCAGGTTCTTAACGG
CTACTGGGCGTATCAAGAATTCTTAAATGAATTTCCAGAACAGAAACACTTAACGGATGCTCTGGCTGCGGCCGTGAGAG
ACGATCCTGTGCCTATTGCCCCTGAAAAAAGACACCCATTAAAAATCTCCGTTGTTTATCCAGGGCAGCAGATTTCCGAT
TACTGGATAAGAAACATCGACGCGTTTGAGAAGCGCTTAGATAAACTCAATATTGATTACCAAATCAATCAAGTGTTTAC
GCGACCAAACGCCGATATCAAACAACAAAGCCTTTCTTTGATGGAAGCACTGAAAAGCAATTCCGACTACTTAATTTTTA
CACTCGATACGACCCGACATCGTAAGTTTGTCGAACATGTTTTAGATTCCACCAAAACCAAACTTATCCTGCAAAATATC
ACGACGCCAGTCCGTGAATGGGAAACTCGACAGCCTTTTATGTACGTCGGTTTCGATCACGCTGAAGGCAGTCGTGAACT
CGCTGTGGAGTTTGGCAAGCAGTTCCCGAAAAATACCCATTACAGCGTTTTGTACTTCTCTGAAGGCTACATTAGCGATA
TCCGTGGTAACACATTCATTCACCAAGTGAACCAAGACAGTCAGTTTGAACTACAATCTGCTTACTATACAAAAGCGACA
AAACAGTCTGGGTATGAAGCTGCAAAAGCCAGTTTGAAAAAATACCCAGATGTCGAGTTCATTTATGCTTGTTCAACCGA
CGTCGCGTTAGGTGCCGTCGAAGCACTTTCTGAACTTGGCCGTGAAGACGTAATGATTAATGGCTGGGGCGGTGGTTCTG
CTGAGCTAGACGCTATCTTAAAAGGGGAGTTAGATATCACCGTCATGCGTATGAATGATGATACTGGCATTGCGATGGCA
GAGGCGATCAAATGGGATTTGGAAGGTAAACCTGTACCAACGGTGTACTCTGGGGACTTCGAAGTTGTGACTAAATCAGA
TTCCCCTGAGCGAATTGAAGCTCTCAGAAAACGTGCATTTAGATACTCAGACAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxP | Vibrio cholerae strain A1552 |
64.56 |
99.726 |
0.644 |