Detailed information NTG0702501

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NI390_RS13405
• Genome accession: NZ_CP099915
• Coordinates: 2849644..2850651 (-)
• Length: 335 a.a.
• NCBI ID: WP_055451895.1
• Uniprot ID: -
• Organism: Vibrio fluvialis strain Isc7A
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2844644..2855651

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NI390_RS13380 (NI390_13375)	rraA	2845284..2845811 (-)	528	WP_222749674.1	ribonuclease E activity regulator RraA	-
NI390_RS13385 (NI390_13380)	-	2845887..2846804 (-)	918	WP_222801594.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NI390_RS13390 (NI390_13385)	hslU	2846893..2848225 (-)	1333	Protein_2550	HslU--HslV peptidase ATPase subunit	-
NI390_RS13395 (NI390_13390)	hslV	2848267..2848821 (-)	555	WP_020329399.1	ATP-dependent protease subunit HslV	-
NI390_RS13400 (NI390_13395)	ftsN	2848957..2849514 (-)	558	WP_024373673.1	cell division protein FtsN	-
NI390_RS13405 (NI390_13400)	cytR	2849644..2850651 (-)	1008	WP_055451895.1	DNA-binding transcriptional regulator CytR	Regulator
NI390_RS13410 (NI390_13405)	priA	2850956..2853157 (-)	2202	WP_308413243.1	primosomal protein N'	-
NI390_RS13415 (NI390_13410)	rpmE	2853403..2853621 (+)	219	WP_020329395.1	50S ribosomal protein L31	-
NI390_RS13420 (NI390_13415)	-	2853833..2855110 (+)	1278	WP_024373675.1	malic enzyme-like NAD(P)-binding protein	-
NI390_RS13425 (NI390_13420)	metJ	2855188..2855505 (-)	318	WP_020329393.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36896.42 Da
• Isoelectric Point: 6.3516

>NTDB_id=702501 NI390_RS13405 WP_055451895.1 2849644..2850651(-) (cytR) [Vibrio fluvialis strain Isc7A]
MATMKDVAQLAGVSTATVSRALMNPEKVSASTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYYTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQMGHKRVAQIAGPEAAVLCQFRQQGYQQALRRAGITRNPTYSISGDFTFESGAKAVRQLLALPEPPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TQLVVRESAAPPRSM

Nucleotide

• Length: 1008 bp

>NTDB_id=702501 NI390_RS13405 WP_055451895.1 2849644..2850651(-) (cytR) [Vibrio fluvialis strain Isc7A]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGCGTTTCGACGGCGACGGTCTCGCGCGCTCTGATGAATCCCGAAAA
AGTTTCAGCCTCAACCCGTAAGCGGGTCGAGGAGGCAGTTTTAGAAGCTGGCTATTCACCGAATTCTTTGGCCCGAAATC
TGCGCCGCAATGAGTCAAAAACCATTGTCGCGATAGTGCCGGATATCTGTGACCCTTATTACACAGAGATCATTCGTGGT
ATCGAAGATGCTGCGATGGAACACGGTTATCTGGTGCTGCTGGGCGACAGCGGACAGCAGAAAAAACGTGAAAGCTCATT
TGTGAACCTGGTGTTTACCAAACAAGCGGACGGCATGTTACTGCTGGGGACTGACTTGCCGTTTGATGTGAGCAAACCCG
AGCAGAAAAACCTGCCACCGATGGTGATGGCGTGTGAGTTTGCGCCGGAGCTTGAGCTACCTACGGTACACATTGATAAC
CTGACATCGGCGTTTGAAGCCGTGAACTATCTGACTCAGATGGGGCACAAACGTGTGGCACAAATCGCCGGACCGGAAGC
CGCGGTGCTGTGTCAGTTTCGTCAGCAAGGTTATCAGCAGGCGCTGCGTCGTGCGGGTATCACTCGCAATCCGACCTACA
GTATAAGTGGTGACTTTACTTTTGAGTCCGGAGCCAAAGCGGTGCGTCAATTATTGGCCCTGCCTGAGCCACCAACGGCT
ATCTTCTGTCACAACGATACCATGGCGATTGGCGCGATTCAGGAAGCGAAACGTCTGGGACTGCGCGTACCGCAGGATCT
CTCTGTGGTGGGCTTTGATGACATTCAATTCGCCCAGTACTGCGATCCACCGCTGACGACCATCTCTCAGCCTCGCTACG
AGATTGGCCGTCAGGCGATGCTGATGATGCTGGAATTGCTGCGTGGTCATGACGTGCGTGCCGGCTCACGTTTGCTGGAA
ACTCAGCTGGTGGTGCGTGAGAGCGCAGCGCCGCCTCGTTCGATGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	94.277	99.104	0.934
cytR	Vibrio parahaemolyticus RIMD 2210633	90.691	99.403	0.901