Detailed information NTG0702103

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: PCP81_RS22255
• Genome accession: NZ_CP115288
• Coordinates: 4765839..4766864 (-)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain F005
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4760839..4771864

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PCP81_RS22230 (PCP81_22225)	aroE	4761041..4761865 (-)	825	WP_003111201.1	shikimate dehydrogenase	-
PCP81_RS22235 (PCP81_22230)	hemF	4761923..4762840 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
PCP81_RS22240 (PCP81_22235)	-	4763031..4764008 (+)	978	WP_003111202.1	NADPH:quinone reductase	-
PCP81_RS22245 (PCP81_22240)	-	4764018..4764575 (-)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
PCP81_RS22250 (PCP81_22245)	dprA	4764616..4765704 (-)	1089	WP_003123764.1	DNA-processing protein DprA	Machinery gene
PCP81_RS22255 (PCP81_22250)	tsaP	4765839..4766864 (-)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
PCP81_RS22260 (PCP81_22255)	def	4767003..4767509 (+)	507	WP_003107059.1	peptide deformylase	-
PCP81_RS22265 (PCP81_22260)	fmt	4767564..4768508 (+)	945	WP_003123763.1	methionyl-tRNA formyltransferase	-
PCP81_RS22270 (PCP81_22265)	rsmB	4768505..4769809 (+)	1305	WP_003114643.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
PCP81_RS22275 (PCP81_22270)	trkA	4769837..4771210 (+)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
PCP81_RS22280 (PCP81_22275)	-	4771359..4771676 (+)	318	WP_003120685.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=702103 PCP81_RS22255 WP_003097294.1 4765839..4766864(-) (tsaP) [Pseudomonas aeruginosa strain F005]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=702103 PCP81_RS22255 WP_003097294.1 4765839..4766864(-) (tsaP) [Pseudomonas aeruginosa strain F005]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACACTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTATGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393