Detailed information NTG0701900

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: NIY03_RS10555
• Genome accession: NZ_CP099855
• Coordinates: 2189803..2190504 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594584.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain 17978R
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2184803..2195504

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NIY03_RS10525 (NIY03_10525)	-	2185110..2185553 (-)	444	WP_001246675.1	SRPBCC family protein	-
NIY03_RS10530 (NIY03_10530)	tadA	2185623..2186126 (-)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
NIY03_RS10535 (NIY03_10535)	-	2186133..2187257 (-)	1125	WP_000982062.1	enoyl-CoA hydratase/isomerase family protein	-
NIY03_RS10540 (NIY03_10540)	ung	2187254..2187967 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
NIY03_RS10545 (NIY03_10545)	-	2188018..2188614 (-)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
NIY03_RS10550 (NIY03_10550)	gspK	2188844..2189803 (-)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
NIY03_RS10555 (NIY03_10555)	xcpW	2189803..2190504 (-)	702	WP_000594584.1	type II secretion system minor pseudopilin GspJ	Machinery gene
NIY03_RS10560 (NIY03_10560)	xcpV	2190504..2190884 (-)	381	WP_000836915.1	type II secretion system minor pseudopilin GspI	Machinery gene
NIY03_RS10565 (NIY03_10565)	-	2190874..2191428 (-)	555	WP_000841375.1	type II secretion system protein	-
NIY03_RS10570 (NIY03_10570)	-	2191438..2192046 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
NIY03_RS10575 (NIY03_10575)	-	2192084..2192857 (-)	774	WP_000497298.1	TatD family hydrolase	-
NIY03_RS10580 (NIY03_10580)	-	2192875..2193216 (-)	342	WP_001183025.1	PilZ domain-containing protein	-
NIY03_RS10585 (NIY03_10585)	-	2193228..2194208 (-)	981	WP_001075412.1	DNA polymerase III subunit delta'	-
NIY03_RS10590 (NIY03_10590)	kdsB	2194220..2194981 (-)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26622.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=701900 NIY03_RS10555 WP_000594584.1 2189803..2190504(-) (xcpW) [Acinetobacter baumannii strain 17978R]
MIKNKYIHIRSIASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLNQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=701900 NIY03_RS10555 WP_000594584.1 2189803..2190504(-) (xcpW) [Acinetobacter baumannii strain 17978R]
ATGATAAAAAATAAATATATTCATATCCGAAGCATTGCTTCTCGTCTTGCGGCGCGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAGTTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAATCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996