Detailed information NTG0701809

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: PCP30_RS21240
• Genome accession: NZ_CP115284
• Coordinates: 4530049..4531074 (+)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain F008
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4525049..4536074

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PCP30_RS21215 (PCP30_21220)	-	4525238..4525555 (-)	318	WP_003097288.1	tetratricopeptide repeat protein	-
PCP30_RS21220 (PCP30_21225)	trkA	4525704..4527077 (-)	1374	WP_003097289.1	Trk system potassium transporter TrkA	-
PCP30_RS21225 (PCP30_21230)	rsmB	4527104..4528408 (-)	1305	WP_014603454.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
PCP30_RS21230 (PCP30_21235)	fmt	4528405..4529349 (-)	945	WP_023098410.1	methionyl-tRNA formyltransferase	-
PCP30_RS21235 (PCP30_21240)	def	4529404..4529910 (-)	507	WP_003097293.1	peptide deformylase	-
PCP30_RS21240 (PCP30_21245)	tsaP	4530049..4531074 (+)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
PCP30_RS21245 (PCP30_21250)	dprA	4531209..4532297 (+)	1089	WP_014602326.1	DNA-processing protein DprA	Machinery gene
PCP30_RS21250 (PCP30_21255)	-	4532338..4532895 (+)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
PCP30_RS21255 (PCP30_21260)	-	4532905..4533882 (-)	978	WP_003097303.1	NADPH:quinone reductase	-
PCP30_RS21260 (PCP30_21265)	hemF	4534073..4534990 (+)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
PCP30_RS21265 (PCP30_21270)	aroE	4535048..4535872 (+)	825	WP_003097314.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=701809 PCP30_RS21240 WP_003097294.1 4530049..4531074(+) (tsaP) [Pseudomonas aeruginosa strain F008]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=701809 PCP30_RS21240 WP_003097294.1 4530049..4531074(+) (tsaP) [Pseudomonas aeruginosa strain F008]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGCGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTAGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393