Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   NHM99_RS20545 Genome accession   NZ_CP099801
Coordinates   3954816..3955610 (-) Length   264 a.a.
NCBI ID   WP_014297988.1    Uniprot ID   A0A1J9YJW5
Organism   Bacillus paranthracis strain SSBC101     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3949816..3960610
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NHM99_RS20520 (NHM99_20520) yqiS 3950050..3950949 (-) 900 WP_000763079.1 phosphate butyryltransferase -
  NHM99_RS20525 (NHM99_20525) - 3951145..3953217 (-) 2073 WP_000811010.1 sigma-54-dependent Fis family transcriptional regulator -
  NHM99_RS20530 (NHM99_20530) - 3953354..3953587 (+) 234 WP_001190187.1 DUF2627 domain-containing protein -
  NHM99_RS20535 (NHM99_20535) - 3953637..3954365 (-) 729 WP_000172554.1 glycerophosphodiester phosphodiesterase -
  NHM99_RS20540 (NHM99_20540) - 3954416..3954562 (+) 147 WP_000803575.1 YycC family protein -
  NHM99_RS20545 (NHM99_20545) spo0A 3954816..3955610 (-) 795 WP_014297988.1 sporulation transcription factor Spo0A Regulator
  NHM99_RS20550 (NHM99_20550) spoIVB 3955897..3957195 (-) 1299 WP_002028467.1 SpoIVB peptidase -
  NHM99_RS20555 (NHM99_20555) recN 3957314..3959053 (-) 1740 WP_000947749.1 DNA repair protein RecN Machinery gene
  NHM99_RS20560 (NHM99_20560) argR 3959320..3959769 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29454.20 Da        Isoelectric Point: 7.4719

>NTDB_id=701699 NHM99_RS20545 WP_014297988.1 3954816..3955610(-) (spo0A) [Bacillus paranthracis strain SSBC101]
MEKIKVCLVDDNKELVSMLESYVAAQEDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=701699 NHM99_RS20545 WP_014297988.1 3954816..3955610(-) (spo0A) [Bacillus paranthracis strain SSBC101]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
GGATATGGAAGTAATTGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTTG
TATTAGATATTATTATGCCACATTTAGATGGGTTAGCTGTACTAGAGAAAATGCGCCATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCGTTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCGTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAAGCGAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGATGCAAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTACATGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGACATCGAATTACT
GGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGTGTCGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATCGATTCTATTTCGTCCTTATTCGGTTATACAGTATCTATGTCA
AAAGCAAAACCTACGAACTCTGAGTTCATCGCAATGGTTGCGGATAAGTTGAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1J9YJW5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

81.273

100

0.822