Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   NHM99_RS06235 Genome accession   NZ_CP099801
Coordinates   1227886..1228569 (+) Length   227 a.a.
NCBI ID   WP_253130196.1    Uniprot ID   -
Organism   Bacillus paranthracis strain SSBC101     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1222886..1233569
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NHM99_RS06215 (NHM99_06215) - 1223956..1225602 (+) 1647 WP_000728616.1 peptide ABC transporter substrate-binding protein -
  NHM99_RS06220 (NHM99_06220) - 1225631..1225834 (-) 204 WP_000559978.1 hypothetical protein -
  NHM99_RS06225 (NHM99_06225) spx 1226427..1226822 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  NHM99_RS06230 (NHM99_06230) - 1226872..1227546 (-) 675 WP_000362603.1 TerC family protein -
  NHM99_RS06235 (NHM99_06235) mecA 1227886..1228569 (+) 684 WP_253130196.1 adaptor protein MecA Regulator
  NHM99_RS06240 (NHM99_06240) - 1228642..1230186 (+) 1545 WP_000799204.1 cardiolipin synthase -
  NHM99_RS06245 (NHM99_06245) - 1230267..1231511 (+) 1245 WP_000612264.1 competence protein CoiA -
  NHM99_RS06250 (NHM99_06250) pepF 1231562..1233388 (+) 1827 WP_000003390.1 oligoendopeptidase F Regulator

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 26942.02 Da        Isoelectric Point: 3.9529

>NTDB_id=701686 NHM99_RS06235 WP_253130196.1 1227886..1228569(+) (mecA) [Bacillus paranthracis strain SSBC101]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQAGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKELALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=701686 NHM99_RS06235 WP_253130196.1 1227886..1228569(+) (mecA) [Bacillus paranthracis strain SSBC101]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGCTTTAATCG
TGAGGAAATTTGGTATGACCGCGAAAGAAGCGAAGAGCTCTTTTGGGAAATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCAGAACTT
TCAAAGGATGGACAAAAGCTAGAACTACCAATAGGTGTAGATAAAATTATAGACATTCCTCTAGATGAAGGTATTGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAGGAACAAGCAGGTACAAACTTTAACGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATTGATCGCATTTTAAG
CATTGTTTTAGAATACGGGGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGGAAACAAATTGTGAAAGAGC
TTGCGCTTGAAACAATTCGCAATAATTTTCCTGCTAAAACGTAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

55.702

100

0.559