Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | PCP51_RS09100 | Genome accession | NZ_CP115283 |
| Coordinates | 1892913..1893509 (+) | Length | 198 a.a. |
| NCBI ID | WP_003111077.1 | Uniprot ID | Q02K17 |
| Organism | Pseudomonas aeruginosa strain F009 | ||
| Function | promote later steps in plasmid transformation (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1887913..1898509
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PCP51_RS09085 (PCP51_09090) | - | 1889458..1890324 (-) | 867 | WP_003140216.1 | substrate-binding periplasmic protein | - |
| PCP51_RS09090 (PCP51_09095) | dnaX | 1890361..1892462 (+) | 2102 | Protein_1784 | DNA polymerase III subunit gamma/tau | - |
| PCP51_RS09095 (PCP51_09100) | - | 1892508..1892834 (+) | 327 | WP_003087236.1 | YbaB/EbfC family nucleoid-associated protein | - |
| PCP51_RS09100 (PCP51_09105) | recR | 1892913..1893509 (+) | 597 | WP_003111077.1 | recombination mediator RecR | Machinery gene |
| PCP51_RS09105 (PCP51_09110) | - | 1893632..1894780 (+) | 1149 | WP_003111078.1 | acyl-CoA dehydrogenase family protein | - |
| PCP51_RS09110 (PCP51_09115) | - | 1894793..1895332 (-) | 540 | WP_003111079.1 | CbrC family protein | - |
| PCP51_RS09115 (PCP51_09120) | - | 1895406..1896293 (-) | 888 | WP_003087246.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| PCP51_RS09120 (PCP51_09125) | - | 1896290..1897873 (-) | 1584 | WP_003121915.1 | flavin-containing monooxygenase | - |
| PCP51_RS09125 (PCP51_09130) | - | 1897995..1898162 (+) | 168 | Protein_1791 | TetR family transcriptional regulator | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21201.48 Da Isoelectric Point: 6.3332
>NTDB_id=701668 PCP51_RS09100 WP_003111077.1 1892913..1893509(+) (recR) [Pseudomonas aeruginosa strain F009]
MSFSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRRCRTLSEEELCPQCADPRRDDS
LLCVVEGPLDVFAVEQTGYRGRYFVLKGHLSPLDGLGPEAIGIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLA
GRGLTLSRIAHGVPLGGELELVDGGTLAHALAGRRPIS
MSFSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRRCRTLSEEELCPQCADPRRDDS
LLCVVEGPLDVFAVEQTGYRGRYFVLKGHLSPLDGLGPEAIGIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLA
GRGLTLSRIAHGVPLGGELELVDGGTLAHALAGRRPIS
Nucleotide
Download Length: 597 bp
>NTDB_id=701668 PCP51_RS09100 WP_003111077.1 1892913..1893509(+) (recR) [Pseudomonas aeruginosa strain F009]
ATGAGTTTCAGCCCGCTGATCCGCCAACTGATCGAGTCCCTGCGCATTCTTCCCGGTGTCGGGCAGAAGTCGGCCCAGCG
CATGGCGCTGATGCTGCTGGAGCGCGATCGCAGCGGCGGCCTGAAGCTGGCCCAGGCGTTGACCGCCGCGATGGAAGGGG
TCGGTCATTGCCGGCGGTGCCGTACCCTCAGCGAGGAGGAGCTGTGCCCGCAGTGCGCCGACCCGCGACGCGACGACTCG
CTGCTCTGCGTGGTGGAAGGCCCTCTGGACGTATTCGCGGTGGAGCAGACCGGCTACCGCGGCCGCTATTTCGTGCTCAA
GGGACACCTGTCGCCGCTCGACGGCCTGGGGCCGGAGGCGATCGGCATTCCCGAACTGGAAGCGCGGATCAGGGACGGAG
CCTTCAGCGAGGTGATCCTCGCCACCAACCCCACCGTGGAAGGCGAGGCCACCGCCCACTATATCGCCCAGCTACTGGCC
GGCCGCGGCCTGACCTTGTCGCGTATCGCCCATGGCGTGCCGCTGGGTGGCGAGCTGGAGCTGGTCGATGGCGGCACCTT
GGCCCACGCCCTGGCCGGACGGCGGCCGATCTCCTGA
ATGAGTTTCAGCCCGCTGATCCGCCAACTGATCGAGTCCCTGCGCATTCTTCCCGGTGTCGGGCAGAAGTCGGCCCAGCG
CATGGCGCTGATGCTGCTGGAGCGCGATCGCAGCGGCGGCCTGAAGCTGGCCCAGGCGTTGACCGCCGCGATGGAAGGGG
TCGGTCATTGCCGGCGGTGCCGTACCCTCAGCGAGGAGGAGCTGTGCCCGCAGTGCGCCGACCCGCGACGCGACGACTCG
CTGCTCTGCGTGGTGGAAGGCCCTCTGGACGTATTCGCGGTGGAGCAGACCGGCTACCGCGGCCGCTATTTCGTGCTCAA
GGGACACCTGTCGCCGCTCGACGGCCTGGGGCCGGAGGCGATCGGCATTCCCGAACTGGAAGCGCGGATCAGGGACGGAG
CCTTCAGCGAGGTGATCCTCGCCACCAACCCCACCGTGGAAGGCGAGGCCACCGCCCACTATATCGCCCAGCTACTGGCC
GGCCGCGGCCTGACCTTGTCGCGTATCGCCCATGGCGTGCCGCTGGGTGGCGAGCTGGAGCTGGTCGATGGCGGCACCTT
GGCCCACGCCCTGGCCGGACGGCGGCCGATCTCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.241 |
100 |
0.485 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
48.469 |
98.99 |
0.48 |