Detailed information NTG0701528

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: PCP35_RS29165
• Genome accession: NZ_CP115278
• Coordinates: 6216341..6217366 (-)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain F011
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6211341..6222366

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PCP35_RS29140 (PCP35_29130)	aroE	6211543..6212367 (-)	825	WP_003111201.1	shikimate dehydrogenase	-
PCP35_RS29145 (PCP35_29135)	hemF	6212425..6213342 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
PCP35_RS29150 (PCP35_29140)	-	6213533..6214510 (+)	978	WP_003111202.1	NADPH:quinone reductase	-
PCP35_RS29155 (PCP35_29145)	-	6214520..6215077 (-)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
PCP35_RS29160 (PCP35_29150)	dprA	6215118..6216206 (-)	1089	WP_003123764.1	DNA-processing protein DprA	Machinery gene
PCP35_RS29165 (PCP35_29155)	tsaP	6216341..6217366 (-)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
PCP35_RS29170 (PCP35_29160)	def	6217505..6218011 (+)	507	WP_003107059.1	peptide deformylase	-
PCP35_RS29175 (PCP35_29165)	fmt	6218066..6219010 (+)	945	WP_003123763.1	methionyl-tRNA formyltransferase	-
PCP35_RS29180 (PCP35_29170)	rsmB	6219007..6220311 (+)	1305	WP_003118477.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
PCP35_RS29185 (PCP35_29175)	trkA	6220339..6221712 (+)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
PCP35_RS29190 (PCP35_29180)	-	6221861..6222178 (+)	318	WP_003120685.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=701528 PCP35_RS29165 WP_003097294.1 6216341..6217366(-) (tsaP) [Pseudomonas aeruginosa strain F011]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=701528 PCP35_RS29165 WP_003097294.1 6216341..6217366(-) (tsaP) [Pseudomonas aeruginosa strain F011]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393