Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   NH673_RS05180 Genome accession   NZ_CP099727
Coordinates   1134998..1135399 (-) Length   133 a.a.
NCBI ID   WP_010955560.1    Uniprot ID   -
Organism   Pseudomonas putida strain PCL1760     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1129998..1140399
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NH673_RS05165 (NH673_05165) - 1131962..1133986 (-) 2025 WP_223279128.1 methyl-accepting chemotaxis protein -
  NH673_RS05170 (NH673_05170) - 1134034..1134588 (-) 555 WP_010955559.1 chemotaxis protein CheW -
  NH673_RS05175 (NH673_05175) pilH 1134585..1134950 (-) 366 WP_014592657.1 twitching motility response regulator PilH -
  NH673_RS05180 (NH673_05180) pilG 1134998..1135399 (-) 402 WP_010955560.1 response regulator Regulator
  NH673_RS05185 (NH673_05185) gshB 1135638..1136591 (+) 954 WP_014592659.1 glutathione synthase -
  NH673_RS05190 (NH673_05190) - 1136683..1137588 (+) 906 WP_014592660.1 energy transducer TonB -
  NH673_RS05195 (NH673_05195) - 1137760..1138329 (+) 570 WP_003249318.1 YqgE/AlgH family protein -
  NH673_RS05200 (NH673_05200) ruvX 1138329..1138754 (+) 426 WP_003249316.1 Holliday junction resolvase RuvX -
  NH673_RS05205 (NH673_05205) pyrR 1138804..1139322 (+) 519 WP_014592661.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  NH673_RS05210 (NH673_05210) - 1139335..1140339 (+) 1005 WP_003249311.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14602.85 Da        Isoelectric Point: 6.4772

>NTDB_id=701338 NH673_RS05180 WP_010955560.1 1134998..1135399(-) (pilG) [Pseudomonas putida strain PCL1760]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHQPSIIFVDVLMPRLDGYQTCAVIKHNSAFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFAAPQQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=701338 NH673_RS05180 WP_010955560.1 1134998..1135399(-) (pilG) [Pseudomonas putida strain PCL1760]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCCCGCACGATCCGCCGCACCGCGCAGATGTTGCTCGGTGAAGC
GGGCTGCGAGGTGATCACCGCCAGCGATGGCTTCGATGCCCTGGCCAAGATCGTCGACCATCAGCCCAGTATCATTTTCG
TCGATGTGTTGATGCCACGCCTGGACGGCTACCAGACCTGCGCGGTAATCAAGCACAACAGTGCCTTCAAGGACACCCCG
GTTATCCTGCTGTCGTCCCGCGATGGCCTGTTTGACAAGGCCCGTGGCCGGGTGGTCGGTTCCGATCAGTTCCTGACCAA
GCCGTTCAGCAAGGAAGAACTGCTCGACGCGATCCGCGCCCATGTGCCCGGGTTTGCCGCACCTCAACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70

90.226

0.632