Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   EL290_RS01660 Genome accession   NZ_AP018585
Coordinates   380192..381088 (+) Length   298 a.a.
NCBI ID   WP_002444546.1    Uniprot ID   -
Organism   Staphylococcus caprae strain JMUB145     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 375192..386088
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL290_RS01640 (JMUB145_0330) - 375328..376473 (+) 1146 WP_037541719.1 DegT/DnrJ/EryC1/StrS family aminotransferase -
  EL290_RS01645 (JMUB145_0331) - 376477..377418 (+) 942 WP_002444555.1 LCP family protein -
  EL290_RS01650 (JMUB145_0332) - 377519..379003 (-) 1485 WP_037541814.1 alkaline phosphatase -
  EL290_RS12650 (JMUB145_0333) - 379337..379489 (+) 153 WP_165764690.1 hypothetical protein -
  EL290_RS01655 (JMUB145_0334) braR 379521..380186 (+) 666 WP_002444548.1 response regulator transcription factor Regulator
  EL290_RS01660 (JMUB145_0335) braS 380192..381088 (+) 897 WP_002444546.1 sensor histidine kinase Regulator
  EL290_RS01665 (JMUB145_0336) - 381199..381948 (+) 750 WP_037541718.1 ABC transporter ATP-binding protein -
  EL290_RS01670 (JMUB145_0337) - 381950..383959 (+) 2010 WP_126493677.1 ABC transporter permease -
  EL290_RS01675 (JMUB145_0338) - 384099..384836 (+) 738 WP_002444541.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34779.08 Da        Isoelectric Point: 5.1196

>NTDB_id=70120 EL290_RS01660 WP_002444546.1 380192..381088(+) (braS) [Staphylococcus caprae strain JMUB145]
MLLSFIKSIRNEISIVVCIFLLFALIFFLFTLPFSAFGLALGIVLLVISIHWWIKYLGFKKDERLKETIDNLENELTEVK
NQQVEYRNDVESYFLTWVHQIKTPITASQLLLERNEENVVNRVRQEIVQIDNYTSLALSYLKLLNEESDMTISEVEMNEL
IRPLIMKYRIQFIEQHTRIHYEKCEDKVLTDAQWVSIMIEQILNNALKYARGKDIWIEFDASEQSLIIKDNGVGISKADI
PKIFDKGYSGYNGRLNEESSGIGLFIVKHISNHLNHEVDVDSKLNEGTTFKIHFPRED

Nucleotide


Download         Length: 897 bp        

>NTDB_id=70120 EL290_RS01660 WP_002444546.1 380192..381088(+) (braS) [Staphylococcus caprae strain JMUB145]
ATGTTACTATCATTTATTAAATCAATTCGTAATGAAATCTCAATCGTAGTATGTATATTTTTATTATTTGCACTTATTTT
CTTCCTGTTTACACTGCCATTCAGTGCTTTCGGTCTTGCGCTAGGTATCGTCTTACTCGTCATATCCATTCATTGGTGGA
TTAAATATCTTGGATTTAAGAAGGATGAGCGTCTTAAAGAGACGATTGATAATTTGGAAAATGAATTAACAGAAGTGAAA
AATCAACAAGTGGAATATCGTAATGATGTAGAAAGTTATTTTCTAACATGGGTGCATCAAATTAAAACGCCTATAACAGC
TTCTCAATTATTACTTGAACGTAATGAAGAAAATGTCGTAAATCGTGTTAGACAAGAAATCGTACAAATCGATAACTATA
CAAGCTTAGCTTTAAGTTATTTGAAATTACTCAACGAAGAATCCGATATGACAATTTCAGAAGTTGAAATGAACGAACTC
ATTCGTCCACTTATTATGAAATATAGAATTCAGTTTATTGAACAACATACGCGAATTCATTATGAAAAATGTGAAGATAA
AGTTTTAACTGATGCGCAATGGGTTTCAATAATGATTGAACAAATTCTTAACAATGCTTTGAAATATGCACGTGGAAAGG
ATATATGGATTGAATTCGATGCATCAGAACAATCACTTATAATCAAAGATAATGGCGTAGGTATCAGTAAAGCAGATATT
CCCAAAATATTTGATAAAGGCTATTCAGGTTATAATGGCAGACTCAATGAAGAATCAAGTGGAATAGGTTTATTTATTGT
TAAACATATTTCTAATCACCTGAATCATGAGGTCGATGTAGATTCAAAACTTAATGAAGGTACAACATTTAAAATCCATT
TTCCGAGAGAAGATTAG

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(194-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

65.763

98.993

0.651

Multiple sequence alignment