Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   NEE09_RS00195 Genome accession   NZ_CP099641
Coordinates   33910..34668 (-) Length   252 a.a.
NCBI ID   WP_000410378.1    Uniprot ID   A0A064C0A8
Organism   Streptococcus pneumoniae strain ATCC 700671     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 28910..39668
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NEE09_RS00165 - 29183..29593 (+) 411 WP_000187312.1 DUF1492 domain-containing protein -
  NEE09_RS00170 - 29749..30141 (+) 393 WP_000417889.1 hypothetical protein -
  NEE09_RS00175 - 30195..30353 (+) 159 WP_000568693.1 hypothetical protein -
  NEE09_RS00180 - 30782..30976 (-) 195 WP_000285193.1 DUF951 domain-containing protein -
  NEE09_RS00185 dnaN 31041..32177 (-) 1137 WP_000581157.1 DNA polymerase III subunit beta -
  NEE09_RS00190 dnaA 32336..33697 (-) 1362 WP_000660618.1 chromosomal replication initiator protein DnaA -
  NEE09_RS00195 spo0J 33910..34668 (-) 759 WP_000410378.1 ParB/RepB/Spo0J family partition protein Regulator
  NEE09_RS00200 htrA 34726..35907 (-) 1182 WP_000681598.1 S1C family serine protease Regulator
  NEE09_RS00205 rlmH 36090..36569 (+) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  NEE09_RS00215 comC/comC1 36851..36976 (+) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  NEE09_RS00220 comD/comD1 36997..38322 (+) 1326 WP_000362880.1 competence system sensor histidine kinase ComD Regulator
  NEE09_RS00225 comE 38319..39071 (+) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29153.50 Da        Isoelectric Point: 9.0667

>NTDB_id=701155 NEE09_RS00195 WP_000410378.1 33910..34668(-) (spo0J) [Streptococcus pneumoniae strain ATCC 700671]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=701155 NEE09_RS00195 WP_000410378.1 33910..34668(-) (spo0J) [Streptococcus pneumoniae strain ATCC 700671]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTTTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
ATTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A064C0A8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508