Detailed information NTG0701070

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: PCP17_RS15045
• Genome accession: NZ_CP115274
• Coordinates: 3251779..3252804 (-)
• Length: 341 a.a.
• NCBI ID: WP_023122440.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain F015
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3246779..3257804

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PCP17_RS15020 (PCP17_15015)	aroE	3246981..3247805 (-)	825	WP_003111201.1	shikimate dehydrogenase	-
PCP17_RS15025 (PCP17_15020)	hemF	3247863..3248780 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
PCP17_RS15030 (PCP17_15025)	-	3248971..3249948 (+)	978	WP_003111202.1	NADPH:quinone reductase	-
PCP17_RS15035 (PCP17_15030)	-	3249958..3250515 (-)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
PCP17_RS15040 (PCP17_15035)	dprA	3250556..3251644 (-)	1089	WP_003118479.1	DNA-processing protein DprA	Machinery gene
PCP17_RS15045 (PCP17_15040)	tsaP	3251779..3252804 (-)	1026	WP_023122440.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
PCP17_RS15050 (PCP17_15045)	def	3252943..3253449 (+)	507	WP_003107059.1	peptide deformylase	-
PCP17_RS15055 (PCP17_15050)	fmt	3253504..3254448 (+)	945	WP_023122439.1	methionyl-tRNA formyltransferase	-
PCP17_RS15060 (PCP17_15055)	rsmB	3254445..3255749 (+)	1305	WP_003122291.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
PCP17_RS15065 (PCP17_15060)	trkA	3255777..3257150 (+)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
PCP17_RS15070 (PCP17_15065)	-	3257299..3257616 (+)	318	WP_003120685.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37585.02 Da
• Isoelectric Point: 9.5379

>NTDB_id=701070 PCP17_RS15045 WP_023122440.1 3251779..3252804(-) (tsaP) [Pseudomonas aeruginosa strain F015]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWNISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=701070 PCP17_RS15045 WP_023122440.1 3251779..3252804(-) (tsaP) [Pseudomonas aeruginosa strain F015]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGAACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACACTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTATGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.24	100	0.39