Detailed information NTG0070099

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: SA58113_RS07985
• Genome accession: NZ_AP018562
• Coordinates: 1644266..1646467 (-)
• Length: 733 a.a.
• NCBI ID: WP_031787280.1
• Uniprot ID: -
• Organism: Staphylococcus argenteus strain 58113
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1639266..1651467

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SA58113_RS07965 (SA58113_1535)	hemW	1639437..1640561 (-)	1125	WP_000216825.1	radical SAM family heme chaperone HemW	-
SA58113_RS07970 (SA58113_1536)	lepA	1640765..1642588 (-)	1824	WP_000356945.1	translation elongation factor 4	-
SA58113_RS07975 (SA58113_1537)	rpsT	1642934..1643185 (+)	252	WP_001274017.1	30S ribosomal protein S20	-
SA58113_RS07980 (SA58113_1538)	holA	1643235..1644209 (-)	975	WP_001282558.1	DNA polymerase III subunit delta	-
SA58113_RS07985 (SA58113_1539)	comEC	1644266..1646467 (-)	2202	WP_031787280.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
SA58113_RS07990 (SA58113_1540)	-	1646472..1646933 (-)	462	WP_000439693.1	ComE operon protein 2	-
SA58113_RS07995 (SA58113_1541)	comEA	1647025..1647726 (-)	702	WP_072324129.1	ComEA family DNA-binding protein	Machinery gene
SA58113_RS08000 (SA58113_1542)	-	1647766..1648482 (-)	717	WP_031787282.1	class I SAM-dependent DNA methyltransferase	-
SA58113_RS08005 (SA58113_1543)	rsfS	1648485..1648838 (-)	354	WP_001088023.1	ribosome silencing factor	-
SA58113_RS08010 (SA58113_1544)	yqeK	1648839..1649423 (-)	585	WP_031787283.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
SA58113_RS08015 (SA58113_1545)	-	1649413..1649982 (-)	570	WP_000725169.1	nicotinate-nucleotide adenylyltransferase	-
SA58113_RS08020 (SA58113_1546)	yhbY	1649985..1650275 (-)	291	WP_000955238.1	ribosome assembly RNA-binding protein YhbY	-
SA58113_RS08025 (SA58113_1547)	aroE	1650280..1651086 (-)	807	WP_031787284.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 733 a.a.
• Molecular weight: 85048.10 Da
• Isoelectric Point: 10.0237

>NTDB_id=70099 SA58113_RS07985 WP_031787280.1 1644266..1646467(-) (comEC) [Staphylococcus argenteus strain 58113]
MLYVALSMIVGVLWNSSKVLSTFLFILLLFIAYRKNKIVYAPISLFLIIFSSWYLHYSHQAVFNYIDYIERNPQFNERAQ
VIQIQRQDSDTYKGRLSLKNEIYPFFLTDKKNFDLKKIESRNCIVKGQFKVNDNKFVTLKLQNIVVQSCLKSNQSNLIEK
HKQFIMNRIYDSGIKFPDRIMALITGDVKEINEQFKERVKEIGIYHLLAVSGSHIAAIVFLIYQPLKRLNFPLFVIKGIT
IIVLALFAQYTNYAPSAVRAIIMTTLVLLITKQIKIKGIQLLAFTFIIMFILNPLVVYDIGFQFSFIISFFIMLLFPFLQ
QLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSIILFPLSILFFITSHFIVGLTPLNYFVDLSFNFH
DWLLELFTRIKQSHFSIPKFNDWIFILFIISVYYIFWLLAKRKYRLVTFWTIIIMTLLITYPTNLHHKITMLNVGQGDSI
LYEGGKNQNVLIDTGGKVINDTKQPSFSISKYHILPTLNERGINELEYLILTHPHNDHIGEVEYIISHIKIKHIVIYNKG
YSSKTLLLLSKLSHKYNIKLMDVRQISSFKLGDSSFQFFDSFIPNSRDKNEYSIITMITYQNKKALLMGDASKNNESLLL
KKYNLPEIDILKVGHHGSKTSSSKEFIEVIRPKISLISSGKNNMYHLPNIEVVKRLQGIRSRIYNSQQSGEVTIDLDENL
KVDSNSYGNASGL

Nucleotide

• Length: 2202 bp

>NTDB_id=70099 SA58113_RS07985 WP_031787280.1 1644266..1646467(-) (comEC) [Staphylococcus argenteus strain 58113]
TTGCTGTATGTCGCATTATCAATGATTGTAGGAGTGCTTTGGAATTCTAGCAAAGTGCTCTCTACATTTCTTTTCATTTT
ACTTTTGTTTATTGCTTATCGTAAAAATAAAATAGTTTATGCTCCTATTTCTCTCTTTTTAATCATTTTTTCCTCATGGT
ATTTACATTATTCACATCAAGCAGTATTTAATTATATCGATTATATTGAACGTAATCCTCAGTTTAATGAGCGTGCTCAA
GTAATCCAAATTCAACGTCAAGATAGTGACACATATAAAGGTAGGTTGAGTTTAAAGAATGAAATATATCCTTTCTTTTT
AACAGATAAAAAGAATTTTGATTTAAAGAAAATTGAAAGTCGTAATTGTATTGTTAAAGGACAATTCAAAGTTAATGACA
ATAAGTTTGTAACTCTTAAATTACAAAATATAGTTGTACAAAGCTGTCTAAAATCGAACCAGTCTAATTTAATTGAGAAA
CATAAACAGTTTATAATGAATCGAATTTATGATTCGGGTATTAAGTTTCCAGATCGTATTATGGCATTGATTACTGGTGA
CGTAAAAGAAATTAATGAGCAATTTAAGGAACGTGTTAAAGAGATAGGTATATATCATTTGCTGGCAGTAAGTGGCTCGC
ATATAGCTGCAATTGTATTCTTAATTTACCAACCTTTAAAACGATTAAATTTTCCTTTATTTGTCATTAAAGGAATTACA
ATCATTGTATTAGCTTTGTTTGCTCAATACACAAATTATGCACCTAGTGCTGTAAGAGCTATAATAATGACAACACTAGT
ACTCCTTATTACTAAGCAAATTAAAATAAAGGGTATTCAGCTATTAGCATTTACTTTTATAATTATGTTTATTTTGAATC
CACTAGTTGTTTATGATATTGGATTTCAATTTTCATTCATCATTTCATTTTTTATTATGCTACTTTTTCCTTTTTTACAG
CAATTGTCAAAGTTACAATCATTATTCATAATTACTTTTATTGCACAATTAGCTTCATTTATCGTTGCCATTCCTAACTT
TCATCAACTTCAATGGGTGGGTTTTTTATCTAATTTGATTTTTGTACCGTACTATTCGATTATACTGTTTCCTCTATCAA
TTTTATTCTTTATTACAAGCCATTTTATTGTGGGCTTAACGCCGCTAAATTACTTTGTTGACCTAAGTTTCAATTTTCAT
GATTGGTTACTAGAACTATTCACTCGAATCAAGCAATCACATTTTTCTATTCCTAAGTTTAATGATTGGATATTTATATT
GTTTATAATTTCTGTTTATTACATATTTTGGTTATTGGCTAAACGTAAATATAGATTGGTTACGTTTTGGACTATAATTA
TTATGACATTATTAATAACATATCCAACAAATTTACATCACAAAATTACAATGTTAAATGTGGGGCAGGGAGATAGTATT
TTATATGAAGGCGGGAAGAACCAAAATGTCTTGATTGATACAGGTGGAAAAGTGATTAATGATACTAAACAACCTAGTTT
TTCAATTTCTAAATATCATATTTTACCAACGCTAAATGAAAGAGGGATAAATGAATTAGAGTATTTAATTTTAACACATC
CACACAATGACCATATTGGTGAAGTTGAATATATTATTAGTCATATTAAAATTAAGCATATAGTGATATACAATAAAGGA
TATAGTAGTAAAACATTGTTGTTATTATCAAAATTAAGCCATAAGTATAACATTAAACTTATGGATGTAAGACAAATTAG
TAGTTTTAAACTTGGGGATAGTAGTTTTCAATTTTTTGATAGTTTTATTCCAAATAGCCGAGATAAAAATGAATATTCGA
TTATTACTATGATTACATATCAAAATAAAAAAGCTTTATTAATGGGAGATGCTAGTAAAAATAATGAATCTTTACTATTA
AAGAAATATAATTTGCCAGAGATTGATATTTTAAAAGTAGGACATCATGGAAGTAAGACAAGTAGTTCTAAAGAATTTAT
AGAGGTGATTAGGCCTAAAATAAGTTTGATTTCTTCTGGGAAGAACAATATGTATCATCTTCCTAACATAGAAGTTGTTA
AACGATTGCAAGGTATTCGCAGTCGCATTTACAATAGTCAACAAAGCGGTGAAGTTACAATAGACTTAGATGAAAATTTA
AAAGTTGATTCAAACTCTTATGGAAATGCAAGTGGTTTATAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (183-441)

• Metallo-beta-lactamase superfamily (Lactamase_B) (474-679)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Staphylococcus aureus N315	95.089	100	0.951
comEC	Staphylococcus aureus MW2	94.679	100	0.947