Detailed information NTG0700624

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: NGM19_RS14540
• Genome accession: NZ_CP099548
• Coordinates: 3043002..3044060 (-)
• Length: 352 a.a.
• NCBI ID: WP_004951546.1
• Uniprot ID: -
• Organism: Acinetobacter junii strain AJ6079
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3038002..3049060

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NGM19_RS14515 (NGM19_14515)	aroK	3038320..3038880 (-)	561	WP_004909618.1	shikimate kinase AroK	-
NGM19_RS14520 (NGM19_14520)	pilQ	3038900..3041032 (-)	2133	WP_252666000.1	type IV pilus secretin PilQ family protein	Machinery gene
NGM19_RS14525 (NGM19_14525)	pilP	3041094..3041621 (-)	528	WP_252665716.1	pilus assembly protein PilP	Machinery gene
NGM19_RS14530 (NGM19_14530)	pilO	3041621..3042361 (-)	741	WP_075696026.1	type 4a pilus biogenesis protein PilO	Machinery gene
NGM19_RS14535 (NGM19_14535)	pilN	3042358..3043002 (-)	645	WP_004909633.1	PilN domain-containing protein	Machinery gene
NGM19_RS14540 (NGM19_14540)	pilM	3043002..3044060 (-)	1059	WP_004951546.1	pilus assembly protein PilM	Machinery gene
NGM19_RS14545 (NGM19_14545)	ponA	3044223..3046802 (+)	2580	WP_004964607.1	penicillin-binding protein PBP1a	-
NGM19_RS14550 (NGM19_14550)	-	3046817..3047635 (-)	819	WP_004964610.1	putative RNA methyltransferase	-
NGM19_RS14555 (NGM19_14555)	mraY	3047690..3048808 (-)	1119	WP_004909640.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39046.77 Da
• Isoelectric Point: 4.5976

>NTDB_id=700624 NGM19_RS14540 WP_004951546.1 3043002..3044060(-) (pilM) [Acinetobacter junii strain AJ6079]
MLRLYRKPNKGLVGVDISSTTVKLLELSVKNGRYWVESYALMPLPENSVVEKSILNPEAVGDALERVVNLANPHTTNVAI
AVPTSMVINKIIEMDADMTDDEREVQIRMDAEQYIPFPLDEVSLDFEVLADRLANPNRVNVLLVATRTENVDSRVEVLEL
AGLKAKIAEVESYAMERAFSVFADTLPMGANTVGILDIGHTMTTLSVMQKGKIIYTREQVFGGKQLTQDVQNRYGLSFEE
AGRAKKERSLPDDYDTEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=700624 NGM19_RS14540 WP_004951546.1 3043002..3044060(-) (pilM) [Acinetobacter junii strain AJ6079]
GTGCTCAGGTTATATCGTAAACCAAATAAGGGGTTAGTGGGTGTCGATATTAGTTCGACAACTGTTAAGTTATTGGAACT
CTCTGTTAAGAACGGTCGATATTGGGTTGAAAGTTATGCATTGATGCCACTACCTGAAAATAGTGTGGTTGAGAAAAGCA
TTTTAAACCCAGAAGCAGTTGGCGACGCGCTTGAACGAGTTGTTAATCTTGCAAACCCTCACACTACCAATGTGGCTATT
GCCGTGCCTACTTCGATGGTCATTAATAAAATCATTGAGATGGATGCTGACATGACGGATGATGAACGGGAAGTTCAAAT
TCGTATGGATGCAGAGCAATATATTCCATTCCCATTAGATGAAGTTAGTTTGGACTTTGAAGTCTTAGCTGATCGATTGG
CCAATCCTAATCGTGTCAATGTGTTATTAGTCGCTACGCGTACTGAGAATGTTGATTCACGTGTTGAAGTTCTGGAACTA
GCAGGTCTAAAGGCAAAGATTGCTGAAGTCGAAAGTTATGCGATGGAGCGTGCTTTTAGTGTATTCGCTGATACGCTACC
TATGGGTGCGAATACAGTGGGTATTCTAGATATTGGGCATACGATGACGACGTTATCGGTCATGCAAAAAGGTAAAATTA
TCTATACTCGTGAGCAAGTGTTTGGTGGAAAACAACTTACTCAAGACGTTCAAAATCGCTATGGTTTATCTTTTGAAGAA
GCTGGTCGAGCTAAAAAAGAAAGAAGTTTGCCAGATGATTACGATACCGAAGTTTTAGAACCGTTTCTTGATGCAGTTGT
GCAACAAGCCGCACGTTCGCTGCAATTCTTTTTCTCATCGTCTCAATTTAATGAAATTGACCACATCCTGTTAGCAGGTG
GTAATGCCAATATTCCAGGTCTAGCTAAACTATTGCAACAAAAGCTAGGTTATCGAGTAACGATTGCCAACCCATTTTTA
CAAATGGGCTTTTCTCCCCAAATCGATATCAAAAAAATAGAAAATGATGCCTCATCGTTGATGGTGGCATGTGGATTAGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	88.352	100	0.884
comM	Acinetobacter nosocomialis M2	88.068	100	0.881
comM	Acinetobacter baylyi ADP1	83.523	100	0.835
pilM	Legionella pneumophila strain ERS1305867	41.525	100	0.418