Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   PCP45_RS02695 Genome accession   NZ_CP115270
Coordinates   519858..520472 (+) Length   204 a.a.
NCBI ID   WP_003091196.1    Uniprot ID   Q02PH1
Organism   Pseudomonas aeruginosa strain F019     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 514858..525472
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PCP45_RS02675 (PCP45_02675) - 516287..516916 (+) 630 WP_171892597.1 CsiV family protein -
  PCP45_RS02680 (PCP45_02680) - 516962..517699 (-) 738 WP_003091193.1 S-methyl-5'-thioinosine phosphorylase -
  PCP45_RS02685 (PCP45_02685) nagZ 517711..518709 (-) 999 WP_003118092.1 beta-N-acetylhexosaminidase -
  PCP45_RS02690 (PCP45_02690) psrA 518925..519626 (-) 702 WP_003091195.1 transcriptional regulator PsrA -
  PCP45_RS02695 (PCP45_02695) dinR/lexA 519858..520472 (+) 615 WP_003091196.1 transcriptional repressor LexA Regulator
  PCP45_RS02700 (PCP45_02700) sulA 520484..520969 (+) 486 WP_003091197.1 SOS-induced cell division inhibitor SulA -
  PCP45_RS02705 (PCP45_02705) - 520991..521224 (-) 234 WP_003109483.1 hypothetical protein -
  PCP45_RS02710 (PCP45_02710) - 521430..521948 (-) 519 WP_003091199.1 DUF6586 family protein -
  PCP45_RS02715 (PCP45_02715) topA 522055..524661 (-) 2607 WP_003091201.1 type I DNA topoisomerase -
  PCP45_RS02720 (PCP45_02720) - 524752..525015 (-) 264 WP_003109484.1 DUF1653 domain-containing protein -

Sequence

Protein


Download         Length: 204 a.a.        Molecular weight: 22505.95 Da        Isoelectric Point: 6.4989

>NTDB_id=700624 PCP45_RS02695 WP_003091196.1 519858..520472(+) (dinR/lexA) [Pseudomonas aeruginosa strain F019]
MQKLTPRQAEILSFIKRCLEDHGFPPTRAEIAQELGFKSPNAAEEHLKALARKGAIEMTPGASRGIRIPGFEPHAANDDE
GLPVIGRVAAGAPILAEQNIEESCRINPAFFNPRADYLLRVRGMSMKDIGILDGDLLAVHVTREARNGQVVVARIGEEVT
VKRFKREGSKVWLLAENPEFAPIEVDLKEQELIIEGLSVGVIRR

Nucleotide


Download         Length: 615 bp        

>NTDB_id=700624 PCP45_RS02695 WP_003091196.1 519858..520472(+) (dinR/lexA) [Pseudomonas aeruginosa strain F019]
ATGCAGAAGCTGACGCCCCGCCAAGCCGAGATCCTCTCCTTCATCAAGCGCTGCCTGGAAGACCACGGCTTTCCGCCGAC
CCGGGCGGAAATCGCCCAGGAACTCGGCTTCAAGTCGCCGAACGCCGCCGAGGAGCACCTCAAGGCGCTGGCACGCAAGG
GCGCCATCGAAATGACTCCGGGCGCCTCTCGCGGCATCCGCATTCCCGGCTTCGAACCGCATGCCGCCAACGACGATGAG
GGCCTGCCGGTGATCGGACGGGTCGCCGCCGGCGCACCGATCCTCGCCGAACAGAACATCGAGGAATCCTGCCGGATCAA
TCCCGCCTTCTTCAATCCTCGCGCCGACTACCTGTTGCGCGTGCGCGGCATGAGCATGAAGGACATCGGCATCCTCGACG
GCGACCTGCTGGCCGTCCACGTCACCCGCGAAGCGCGCAACGGCCAAGTGGTGGTCGCGCGGATCGGCGAGGAGGTCACG
GTGAAACGCTTCAAGCGCGAAGGCAGCAAGGTCTGGCTGCTGGCGGAAAACCCTGAGTTCGCTCCGATCGAAGTCGATCT
GAAGGAGCAGGAACTGATCATCGAAGGCTTGAGCGTCGGCGTGATCCGACGCTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(83-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q02PH1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

38.35

100

0.387