Detailed information NTG0700608

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: NGM19_RS07315
• Genome accession: NZ_CP099548
• Coordinates: 1568265..1568993 (+)
• Length: 242 a.a.
• NCBI ID: WP_228134839.1
• Uniprot ID: -
• Organism: Acinetobacter junii strain AJ6079
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1563265..1573993

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NGM19_RS07280 (NGM19_07280)	kdsB	1563457..1564218 (+)	762	WP_039047964.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
NGM19_RS07285 (NGM19_07285)	-	1564220..1565206 (+)	987	WP_039047965.1	DNA polymerase III subunit delta'	-
NGM19_RS07290 (NGM19_07290)	-	1565433..1565777 (+)	345	WP_252665976.1	PilZ domain-containing protein	-
NGM19_RS07295 (NGM19_07295)	-	1565800..1566573 (+)	774	WP_039047966.1	TatD family hydrolase	-
NGM19_RS07300 (NGM19_07300)	-	1566612..1567220 (+)	609	WP_039047967.1	TetR/AcrR family transcriptional regulator	-
NGM19_RS07305 (NGM19_07305)	-	1567233..1567781 (+)	549	WP_039047968.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
NGM19_RS07310 (NGM19_07310)	xcpV	1567795..1568268 (+)	474	WP_228134840.1	type II secretion system minor pseudopilin GspI	Machinery gene
NGM19_RS07315 (NGM19_07315)	xcpW	1568265..1568993 (+)	729	WP_228134839.1	type II secretion system minor pseudopilin GspJ	Machinery gene
NGM19_RS07320 (NGM19_07320)	gspK	1568990..1569949 (+)	960	WP_039047969.1	type II secretion system minor pseudopilin GspK	-
NGM19_RS07325 (NGM19_07325)	-	1570056..1570652 (+)	597	WP_004954093.1	6-carboxytetrahydropterin synthase	-
NGM19_RS07330 (NGM19_07330)	ung	1570691..1571404 (+)	714	WP_004911491.1	uracil-DNA glycosylase	-
NGM19_RS07335 (NGM19_07335)	-	1571401..1572525 (+)	1125	WP_171053792.1	enoyl-CoA hydratase/isomerase family protein	-
NGM19_RS07340 (NGM19_07340)	tadA	1572532..1573035 (+)	504	WP_004962178.1	tRNA adenosine(34) deaminase TadA	-
NGM19_RS07345 (NGM19_07345)	-	1573102..1573542 (+)	441	WP_004962173.1	SRPBCC family protein	-

Sequence

Protein

• Length: 242 a.a.
• Molecular weight: 27858.16 Da
• Isoelectric Point: 9.1459

>NTDB_id=700608 NGM19_RS07315 WP_228134839.1 1568265..1568993(+) (xcpW) [Acinetobacter junii strain AJ6079]
MKIKNVVMRLGCRFNVVSECQQSSTKSYLPKKIKSNLGFTLVELLVAIAIFAVLSMLGWKVFDYLIKVKDRNAEHETHLF
ELQDAYQQFLKDSMQIIPLTANDGRQLQAAMVLNDRSFSFSKAGVSDPLKQGLSPYERIEYRYDAQQKKVYRLKYTNLNI
PNRVQPVSSTLLENVDQFRILILNPQEISQWPENINDPNNVNELKKLPLGFKVQLTIAGSDYEWIYSLLNANQLLVNQET
PP

Nucleotide

• Length: 729 bp

>NTDB_id=700608 NGM19_RS07315 WP_228134839.1 1568265..1568993(+) (xcpW) [Acinetobacter junii strain AJ6079]
ATGAAAATCAAGAATGTTGTAATGAGGTTGGGTTGCAGATTTAATGTTGTCTCAGAATGTCAGCAAAGTTCAACTAAGTC
TTATTTACCAAAAAAAATTAAGAGTAATTTAGGTTTTACTTTAGTTGAGTTGCTTGTTGCGATTGCGATATTTGCAGTGC
TTTCAATGTTGGGGTGGAAAGTTTTTGATTATCTCATCAAAGTGAAAGATAGAAATGCAGAACATGAAACACACTTATTT
GAATTACAGGATGCTTATCAGCAATTTTTAAAAGATAGCATGCAGATAATTCCATTGACTGCAAATGATGGGCGACAATT
ACAAGCAGCTATGGTTTTGAATGATCGAAGTTTTAGTTTTAGTAAGGCTGGGGTATCTGATCCATTGAAGCAAGGTCTTT
CACCATATGAGCGAATAGAATACAGATATGATGCACAACAAAAAAAAGTTTACCGTTTGAAATATACAAATTTAAATATT
CCAAATCGTGTGCAACCAGTATCAAGCACTTTACTTGAAAATGTAGATCAATTTAGAATTTTGATTTTAAATCCACAAGA
AATTAGCCAATGGCCTGAAAATATTAATGATCCAAATAATGTAAATGAATTAAAGAAGTTACCATTAGGTTTTAAAGTTC
AATTAACGATTGCTGGTTCAGATTATGAGTGGATTTATAGTTTATTAAATGCCAATCAGTTATTGGTCAATCAGGAAACT
CCACCATGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (34-57)

• Type II secretion system (T2SS), protein J (T2SSJ) (91-219)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	61.506	98.76	0.607