Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | LPT22_RS05860 | Genome accession | NZ_CP099506 |
| Coordinates | 1218225..1218524 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain 0316-H-5A | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1213225..1223524
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPT22_RS05835 (LPT22_05835) | gcvPA | 1214437..1215783 (-) | 1347 | WP_000019698.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| LPT22_RS05840 (LPT22_05840) | gcvT | 1215803..1216894 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| LPT22_RS05845 (LPT22_05845) | - | 1217053..1217577 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| LPT22_RS05850 (LPT22_05850) | - | 1217567..1217713 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| LPT22_RS05855 (LPT22_05855) | comGF | 1217810..1218307 (-) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| LPT22_RS05860 (LPT22_05860) | comGE | 1218225..1218524 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| LPT22_RS05865 (LPT22_05865) | comGD | 1218511..1218957 (-) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| LPT22_RS05870 (LPT22_05870) | comGC | 1218935..1219246 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| LPT22_RS05875 (LPT22_05875) | comGB | 1219260..1220330 (-) | 1071 | WP_000776425.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| LPT22_RS05880 (LPT22_05880) | comGA | 1220302..1221276 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| LPT22_RS05885 (LPT22_05885) | - | 1221328..1221951 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| LPT22_RS05890 (LPT22_05890) | - | 1221948..1222277 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| LPT22_RS05895 (LPT22_05895) | - | 1222277..1223263 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| LPT22_RS05900 (LPT22_05900) | - | 1223260..1223463 (-) | 204 | WP_000087559.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=700234 LPT22_RS05860 WP_000844413.1 1218225..1218524(-) (comGE) [Staphylococcus aureus strain 0316-H-5A]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=700234 LPT22_RS05860 WP_000844413.1 1218225..1218524(-) (comGE) [Staphylococcus aureus strain 0316-H-5A]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |