Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | LPT17_RS02275 | Genome accession | NZ_CP099502 |
| Coordinates | 423528..423827 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain JL42 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 418528..428827
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPT17_RS02235 (LPT17_02235) | - | 418589..418792 (+) | 204 | WP_000087559.1 | YqgQ family protein | - |
| LPT17_RS02240 (LPT17_02240) | - | 418789..419775 (+) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| LPT17_RS02245 (LPT17_02245) | - | 419775..420104 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| LPT17_RS02250 (LPT17_02250) | - | 420101..420724 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| LPT17_RS02255 (LPT17_02255) | comGA | 420776..421750 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| LPT17_RS02260 (LPT17_02260) | comGB | 421722..422792 (+) | 1071 | WP_000776425.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| LPT17_RS02265 (LPT17_02265) | comGC | 422806..423117 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| LPT17_RS02270 (LPT17_02270) | comGD | 423095..423541 (+) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| LPT17_RS02275 (LPT17_02275) | comGE | 423528..423827 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| LPT17_RS02280 (LPT17_02280) | comGF | 423745..424242 (+) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| LPT17_RS02285 (LPT17_02285) | - | 424339..424485 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| LPT17_RS02290 (LPT17_02290) | - | 424475..424999 (+) | 525 | WP_001015120.1 | shikimate kinase | - |
| LPT17_RS02295 (LPT17_02295) | gcvT | 425158..426249 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| LPT17_RS02300 (LPT17_02300) | gcvPA | 426269..427615 (+) | 1347 | WP_000019698.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=700147 LPT17_RS02275 WP_000844413.1 423528..423827(+) (comGE) [Staphylococcus aureus strain JL42]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=700147 LPT17_RS02275 WP_000844413.1 423528..423827(+) (comGE) [Staphylococcus aureus strain JL42]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |