Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NF199_RS07190 Genome accession   NZ_CP099460
Coordinates   1372834..1373430 (+) Length   198 a.a.
NCBI ID   WP_265606253.1    Uniprot ID   -
Organism   Bacillus velezensis strain E     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1367834..1378430
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NF199_RS07160 - 1368045..1368500 (+) 456 WP_032874735.1 flavodoxin -
  NF199_RS07165 dapD 1368582..1369292 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NF199_RS07170 - 1369363..1370487 (+) 1125 WP_032874737.1 N-acetyldiaminopimelate deacetylase -
  NF199_RS07175 - 1370548..1370793 (+) 246 WP_003154596.1 YkuS family protein -
  NF199_RS07180 - 1370828..1371634 (-) 807 WP_032874739.1 mechanosensitive ion channel family protein -
  NF199_RS07185 - 1371923..1372381 (+) 459 WP_032874741.1 TlpA disulfide reductase family protein -
  NF199_RS07190 rok 1372834..1373430 (+) 597 WP_265606253.1 transcriptional regulator Rok Regulator
  NF199_RS07195 - 1373454..1374446 (-) 993 WP_032874743.1 hypothetical protein -
  NF199_RS07200 - 1374592..1375194 (+) 603 WP_032874745.1 molybdenum cofactor guanylyltransferase -
  NF199_RS07205 - 1375246..1376265 (+) 1020 WP_265606254.1 molybdopterin-synthase adenylyltransferase MoeB -
  NF199_RS07210 glp 1376283..1377575 (+) 1293 WP_032874748.1 gephyrin-like molybdotransferase Glp -
  NF199_RS07215 mobB 1377536..1378057 (+) 522 WP_007409631.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22555.60 Da        Isoelectric Point: 9.6909

>NTDB_id=699774 NF199_RS07190 WP_265606253.1 1372834..1373430(+) (rok) [Bacillus velezensis strain E]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREATIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=699774 NF199_RS07190 WP_265606253.1 1372834..1373430(+) (rok) [Bacillus velezensis strain E]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCGACGATTAAAACATTGAAACGCCACAATG
CGGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

85.567

97.98

0.838