Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | PCP63_RS01735 | Genome accession | NZ_CP115258 |
| Coordinates | 374546..375142 (+) | Length | 198 a.a. |
| NCBI ID | WP_003087237.1 | Uniprot ID | Q9I3H9 |
| Organism | Pseudomonas aeruginosa strain F028 | ||
| Function | promote later steps in plasmid transformation (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 369546..380142
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PCP63_RS01710 (PCP63_01710) | - | 370462..370839 (+) | 378 | WP_003083354.1 | hypothetical protein | - |
| PCP63_RS01720 (PCP63_01720) | - | 371093..371959 (-) | 867 | WP_003120462.1 | substrate-binding periplasmic protein | - |
| PCP63_RS01725 (PCP63_01725) | dnaX | 371996..374095 (+) | 2100 | WP_329034407.1 | DNA polymerase III subunit gamma/tau | - |
| PCP63_RS01730 (PCP63_01730) | - | 374141..374467 (+) | 327 | WP_003087236.1 | YbaB/EbfC family nucleoid-associated protein | - |
| PCP63_RS01735 (PCP63_01735) | recR | 374546..375142 (+) | 597 | WP_003087237.1 | recombination mediator RecR | Machinery gene |
| PCP63_RS01740 (PCP63_01740) | - | 375265..376413 (+) | 1149 | WP_003103930.1 | acyl-CoA dehydrogenase family protein | - |
| PCP63_RS01745 (PCP63_01745) | - | 376426..376965 (-) | 540 | WP_003103931.1 | CbrC family protein | - |
| PCP63_RS01750 (PCP63_01750) | - | 377039..377926 (-) | 888 | WP_003103932.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| PCP63_RS01755 (PCP63_01755) | - | 377923..379506 (-) | 1584 | WP_096220224.1 | flavin-containing monooxygenase | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21173.42 Da Isoelectric Point: 6.0063
>NTDB_id=699694 PCP63_RS01735 WP_003087237.1 374546..375142(+) (recR) [Pseudomonas aeruginosa strain F028]
MSFSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRQCRTLSEEELCPQCADPRRDDS
LLCVVEGPLDVFAVEQTGYRGRYFVLKGHLSPLDGLGPEAIGIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLA
GRGLTLSRIAHGVPLGGELELVDGGTLAHALAGRRPIS
MSFSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRQCRTLSEEELCPQCADPRRDDS
LLCVVEGPLDVFAVEQTGYRGRYFVLKGHLSPLDGLGPEAIGIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLA
GRGLTLSRIAHGVPLGGELELVDGGTLAHALAGRRPIS
Nucleotide
Download Length: 597 bp
>NTDB_id=699694 PCP63_RS01735 WP_003087237.1 374546..375142(+) (recR) [Pseudomonas aeruginosa strain F028]
ATGAGTTTCAGCCCGCTGATCCGCCAACTGATCGAGTCCCTGCGCATTCTTCCCGGTGTCGGGCAGAAGTCGGCCCAGCG
CATGGCGCTGATGCTGCTGGAGCGCGATCGCAGCGGCGGCCTGAAGCTGGCCCAGGCGTTGACCGCCGCGATGGAAGGGG
TCGGTCATTGCCGGCAGTGCCGTACCCTCAGCGAGGAGGAGTTGTGCCCGCAGTGCGCCGACCCGCGACGCGACGACTCG
CTGCTCTGCGTGGTGGAAGGCCCGCTGGACGTATTCGCGGTGGAGCAGACCGGCTACCGCGGCCGCTATTTCGTGCTCAA
GGGACACCTGTCGCCGCTCGACGGCCTGGGGCCGGAGGCGATCGGCATTCCCGAACTGGAAGCGCGGATCAGGGACGGAG
CCTTCAGCGAGGTGATCCTCGCCACCAACCCCACCGTCGAAGGCGAGGCCACCGCCCACTATATCGCCCAGCTACTGGCC
GGCCGTGGCCTGACCTTGTCGCGTATCGCCCATGGCGTGCCGCTGGGCGGCGAGCTGGAGCTGGTCGATGGCGGCACCTT
GGCCCACGCCCTGGCCGGACGGCGGCCGATCTCCTGA
ATGAGTTTCAGCCCGCTGATCCGCCAACTGATCGAGTCCCTGCGCATTCTTCCCGGTGTCGGGCAGAAGTCGGCCCAGCG
CATGGCGCTGATGCTGCTGGAGCGCGATCGCAGCGGCGGCCTGAAGCTGGCCCAGGCGTTGACCGCCGCGATGGAAGGGG
TCGGTCATTGCCGGCAGTGCCGTACCCTCAGCGAGGAGGAGTTGTGCCCGCAGTGCGCCGACCCGCGACGCGACGACTCG
CTGCTCTGCGTGGTGGAAGGCCCGCTGGACGTATTCGCGGTGGAGCAGACCGGCTACCGCGGCCGCTATTTCGTGCTCAA
GGGACACCTGTCGCCGCTCGACGGCCTGGGGCCGGAGGCGATCGGCATTCCCGAACTGGAAGCGCGGATCAGGGACGGAG
CCTTCAGCGAGGTGATCCTCGCCACCAACCCCACCGTCGAAGGCGAGGCCACCGCCCACTATATCGCCCAGCTACTGGCC
GGCCGTGGCCTGACCTTGTCGCGTATCGCCCATGGCGTGCCGCTGGGCGGCGAGCTGGAGCTGGTCGATGGCGGCACCTT
GGCCCACGCCCTGGCCGGACGGCGGCCGATCTCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.241 |
100 |
0.485 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
48.469 |
98.99 |
0.48 |