Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NE411_RS26395 Genome accession   NZ_CP099450
Coordinates   5081150..5081326 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus pacificus strain ANSB901     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 5076150..5086326
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NE411_RS26375 (NE411_26315) clpC 5076483..5079083 (+) 2601 WP_000365369.1 ATP-dependent chaperone ClpB Regulator
  NE411_RS26380 (NE411_26320) - 5079121..5079303 (-) 183 WP_001211115.1 YjzD family protein -
  NE411_RS26385 (NE411_26325) - 5079460..5080194 (+) 735 WP_000028715.1 hydrolase -
  NE411_RS26390 (NE411_26330) - 5080224..5081096 (+) 873 WP_000486162.1 NAD-dependent epimerase/dehydratase family protein -
  NE411_RS26395 (NE411_26335) comZ 5081150..5081326 (+) 177 WP_001986215.1 ComZ family protein Regulator
  NE411_RS26400 (NE411_26340) fabH 5081558..5082490 (+) 933 WP_001100536.1 beta-ketoacyl-ACP synthase III -
  NE411_RS26405 (NE411_26345) fabF 5082521..5083759 (+) 1239 WP_000412648.1 beta-ketoacyl-ACP synthase II -
  NE411_RS26410 (NE411_26350) - 5083866..5084654 (+) 789 WP_000539320.1 DUF2268 domain-containing protein -
  NE411_RS26415 (NE411_26355) - 5084798..5085544 (+) 747 WP_000966125.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=699618 NE411_RS26395 WP_001986215.1 5081150..5081326(+) (comZ) [Bacillus pacificus strain ANSB901]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=699618 NE411_RS26395 WP_001986215.1 5081150..5081326(+) (comZ) [Bacillus pacificus strain ANSB901]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCTAAGGCCATTTTAGATGATAATGG
AATTGCGCTTGATATGGAGAAAGCTCAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586