Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SA27298_RS01470 Genome accession   NZ_AP018548
Coordinates   287103..287834 (+) Length   243 a.a.
NCBI ID   WP_004344524.1    Uniprot ID   -
Organism   Streptococcus anginosus strain CCUG 27928     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 282103..292834
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SA27298_RS01440 (SA27298_0293) - 282427..283866 (+) 1440 WP_004225012.1 NCS2 family permease -
  SA27298_RS01445 (SA27298_0294) tsaE 284204..284644 (+) 441 WP_004344533.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SA27298_RS01450 (SA27298_0295) - 284637..285158 (+) 522 WP_003033089.1 GNAT family N-acetyltransferase -
  SA27298_RS01455 (SA27298_0296) - 285165..286280 (+) 1116 WP_004224985.1 LCP family protein -
  SA27298_RS01460 (SA27298_0297) - 286327..286614 (-) 288 WP_004224964.1 hypothetical protein -
  SA27298_RS01465 (SA27298_0298) - 286624..287034 (-) 411 WP_004344535.1 HIT family protein -
  SA27298_RS01470 (SA27298_0299) pptA 287103..287834 (+) 732 WP_004344524.1 ABC transporter ATP-binding protein Regulator
  SA27298_RS01475 (SA27298_0300) - 287831..288877 (+) 1047 WP_004225005.1 ABC transporter permease -
  SA27298_RS01480 (SA27298_0301) - 288928..289725 (+) 798 WP_003043230.1 phosphotransferase family protein -
  SA27298_RS01485 (SA27298_0302) trmB 289722..290357 (+) 636 WP_003033795.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SA27298_RS01490 (SA27298_0303) - 290974..291663 (+) 690 WP_026248194.1 VIT family protein -
  SA27298_RS01495 (SA27298_0304) rimP 291932..292402 (+) 471 WP_306302048.1 ribosome maturation factor RimP -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26859.52 Da        Isoelectric Point: 4.9159

>NTDB_id=69955 SA27298_RS01470 WP_004344524.1 287103..287834(+) (pptA) [Streptococcus anginosus strain CCUG 27928]
MLEIKGLTGGYVNIPVLKDISFTVGNGKLVGLIGLNGAGKSTTINEIIGLLTPYKGEILIDGAKLQDSPTVYRKKIGFIP
ETPSLYEELTLREHIETVAMAYDVEQKVAFARVEKLLTMFRLKEKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPVAIADLIELLEDEKAKGKSILMSTHVLDSAEKMCDSFVILHKGEIRAKGNLAELRAEFAMPEASLNDIYLALTEE
ASL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=69955 SA27298_RS01470 WP_004344524.1 287103..287834(+) (pptA) [Streptococcus anginosus strain CCUG 27928]
ATGTTAGAAATAAAAGGGCTTACAGGGGGCTATGTGAATATCCCTGTTTTAAAAGACATCAGTTTCACAGTAGGAAATGG
GAAATTGGTGGGGTTGATTGGCTTGAATGGTGCGGGTAAATCCACTACAATCAATGAAATTATTGGACTTTTAACACCTT
ATAAGGGTGAAATTTTAATTGACGGTGCCAAACTGCAAGATAGTCCTACAGTTTATCGTAAGAAAATTGGTTTTATTCCG
GAAACACCTAGTTTGTATGAGGAATTAACGCTGCGCGAGCATATTGAAACGGTTGCTATGGCTTATGATGTGGAGCAAAA
GGTGGCTTTTGCGCGCGTGGAGAAATTATTGACGATGTTTCGCTTGAAAGAAAAATTGGATTGGTTTCCGGTGCATTTTT
CTAAAGGAATGAAGCAAAAAGTCATGATTATCTGTGCATTTGTGGTTGACCCCAGCCTTTTTATCGTTGATGAACCATTT
TTGGGACTTGATCCAGTTGCTATTGCTGACTTGATAGAGCTTTTGGAGGATGAAAAGGCAAAAGGCAAGTCAATTCTCAT
GAGTACGCATGTGCTGGATTCGGCAGAAAAGATGTGTGATTCATTCGTGATATTACATAAGGGAGAAATCCGAGCTAAAG
GCAATTTAGCAGAATTACGAGCAGAATTTGCCATGCCAGAAGCTAGTCTCAATGACATTTATCTAGCTTTGACAGAAGAG
GCGAGCCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

72.385

98.354

0.712
  pptA Streptococcus salivarius strain HSISS4

71.967

98.354

0.708

Multiple sequence alignment