Detailed information NTG0698902

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: PCP83_RS06730
• Genome accession: NZ_CP115250
• Coordinates: 1420850..1421875 (-)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain F036
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1415850..1426875

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PCP83_RS06705 (PCP83_06705)	aroE	1416052..1416876 (-)	825	WP_003111201.1	shikimate dehydrogenase	-
PCP83_RS06710 (PCP83_06710)	hemF	1416934..1417851 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
PCP83_RS06715 (PCP83_06715)	-	1418042..1419019 (+)	978	WP_003111202.1	NADPH:quinone reductase	-
PCP83_RS06720 (PCP83_06720)	-	1419029..1419586 (-)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
PCP83_RS06725 (PCP83_06725)	dprA	1419627..1420715 (-)	1089	WP_003123764.1	DNA-processing protein DprA	Machinery gene
PCP83_RS06730 (PCP83_06730)	tsaP	1420850..1421875 (-)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
PCP83_RS06735 (PCP83_06735)	def	1422014..1422520 (+)	507	WP_003107059.1	peptide deformylase	-
PCP83_RS06740 (PCP83_06740)	fmt	1422575..1423519 (+)	945	WP_003123763.1	methionyl-tRNA formyltransferase	-
PCP83_RS06745 (PCP83_06745)	rsmB	1423516..1424820 (+)	1305	WP_003122291.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
PCP83_RS06750 (PCP83_06750)	trkA	1424848..1426221 (+)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
PCP83_RS06755 (PCP83_06755)	-	1426370..1426687 (+)	318	WP_003120685.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=698902 PCP83_RS06730 WP_003097294.1 1420850..1421875(-) (tsaP) [Pseudomonas aeruginosa strain F036]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=698902 PCP83_RS06730 WP_003097294.1 1420850..1421875(-) (tsaP) [Pseudomonas aeruginosa strain F036]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACACTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGGCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCT
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393