Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   NFL40_RS14035 Genome accession   NZ_CP099323
Coordinates   2937653..2938279 (-) Length   208 a.a.
NCBI ID   WP_023299743.1    Uniprot ID   A0A9X7L0J6
Organism   Enterobacter hormaechei strain RHB45-SO-C08     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2932653..2943279
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NFL40_RS14020 (NFL40_14010) helD 2932892..2934946 (-) 2055 WP_048965560.1 DNA helicase IV -
  NFL40_RS14025 (NFL40_14015) - 2935069..2935515 (+) 447 WP_022647660.1 YccF domain-containing protein -
  NFL40_RS14030 (NFL40_14020) yccS 2935534..2937696 (+) 2163 WP_046618420.1 YccS family putative transporter -
  NFL40_RS14035 (NFL40_14025) sxy/tfoX 2937653..2938279 (-) 627 WP_023299743.1 TfoX/Sxy family DNA transformation protein Regulator
  NFL40_RS14040 (NFL40_14030) sulA 2938497..2939006 (+) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  NFL40_RS14045 (NFL40_14035) ompA 2939363..2940415 (+) 1053 WP_017694761.1 porin OmpA -
  NFL40_RS14050 (NFL40_14040) matP 2940481..2940933 (-) 453 WP_006809347.1 macrodomain Ter protein MatP -
  NFL40_RS14055 (NFL40_14045) - 2941120..2942880 (+) 1761 WP_023305819.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23988.54 Da        Isoelectric Point: 9.4592

>NTDB_id=698758 NFL40_RS14035 WP_023299743.1 2937653..2938279(-) (sxy/tfoX) [Enterobacter hormaechei strain RHB45-SO-C08]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=698758 NFL40_RS14035 WP_023299743.1 2937653..2938279(-) (sxy/tfoX) [Enterobacter hormaechei strain RHB45-SO-C08]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGTGAGCTTTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCTTCTTTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572