Detailed information NTG0069857

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: HXS64_RS00185
• Genome accession: NZ_AP023235
• Coordinates: 47352..48377 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain YJ6
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 42352..53377

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HXS64_RS00165	metJ	43413..43730 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
HXS64_RS00170	yiiX	43914..44522 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
HXS64_RS00175	rpmE	44583..44795 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
HXS64_RS00180	priA	44998..47196 (+)	2199	WP_001355569.1	primosomal protein N'	Machinery gene
HXS64_RS00185	cytR	47352..48377 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
HXS64_RS00190	ftsN	48469..49428 (+)	960	WP_000068828.1	cell division protein FtsN	-
HXS64_RS00195	hslV	49521..50051 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
HXS64_RS00200	hslU	50061..51392 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
HXS64_RS00205	menA	51459..52385 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
HXS64_RS00210	rraA	52478..52963 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
HXS64_RS00215	zapB	53048..53293 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=69857 HXS64_RS00185 WP_000644904.1 47352..48377(+) (cytR) [Escherichia coli strain YJ6]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=69857 HXS64_RS00185 WP_000644904.1 47352..48377(+) (cytR) [Escherichia coli strain YJ6]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628