Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   NF322_RS01250 Genome accession   NZ_CP098816
Coordinates   288182..288847 (+) Length   221 a.a.
NCBI ID   WP_002436233.1    Uniprot ID   A0A0S4M7T5
Organism   Staphylococcus capitis strain LZD8_nano     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 283182..293847
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NF322_RS01225 (NF322_01225) - 283270..283896 (-) 627 WP_030059212.1 FMN-dependent NADH-azoreductase -
  NF322_RS01230 (NF322_01230) - 284168..284269 (+) 102 WP_016898541.1 SE2200 family small protein -
  NF322_RS01235 (NF322_01235) - 284453..285994 (+) 1542 Protein_243 NAD(P)H-binding protein -
  NF322_RS01240 (NF322_01240) - 286188..287672 (-) 1485 WP_030059210.1 alkaline phosphatase -
  NF322_RS01245 (NF322_01245) - 287999..288151 (+) 153 WP_002436229.1 hypothetical protein -
  NF322_RS01250 (NF322_01250) braR 288182..288847 (+) 666 WP_002436233.1 response regulator transcription factor Regulator
  NF322_RS01255 (NF322_01255) braS 288853..289749 (+) 897 WP_030059207.1 sensor histidine kinase Regulator
  NF322_RS01260 (NF322_01260) - 289859..290608 (+) 750 WP_030059205.1 ABC transporter ATP-binding protein -
  NF322_RS01265 (NF322_01265) - 290610..292625 (+) 2016 WP_030059203.1 ABC transporter permease -
  NF322_RS01270 (NF322_01270) - 292852..293724 (+) 873 WP_030059201.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25518.37 Da        Isoelectric Point: 4.3102

>NTDB_id=698136 NF322_RS01250 WP_002436233.1 288182..288847(+) (braR) [Staphylococcus capitis strain LZD8_nano]
MKILIVEDDLVIAESLANELSKWNYEVNVVENFDQIMEDFRETEPQLVLLDINLPTLNGFHWCQEMRKESNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSVSNDELDVKGCKLILDEAKLVKDDDAVQLSLTELQILK
MLFQNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDDFIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=698136 NF322_RS01250 WP_002436233.1 288182..288847(+) (braR) [Staphylococcus capitis strain LZD8_nano]
ATGAAGATTCTCATAGTCGAAGATGATTTAGTTATTGCTGAGAGCTTGGCTAATGAACTTTCAAAATGGAATTATGAAGT
GAATGTTGTTGAAAACTTTGATCAAATTATGGAAGATTTTCGTGAAACAGAACCACAACTAGTATTGTTAGATATCAATT
TACCTACACTCAATGGATTTCATTGGTGCCAAGAAATGCGCAAAGAATCTAATGTTCCTATCATGTTTATTAGTTCAAGA
ACCGATAATATGGATCAAATTATGGCTATTCAAATGGGTGGCGATGACTTTATTGAGAAACCGTTCAATTTATCGCTAAC
AGTAGCGAAGATACAAGCGTTACTTCGCCGTACATACGATTTATCCGTATCAAATGATGAATTAGATGTGAAAGGTTGCA
AGTTGATTCTTGATGAGGCGAAACTCGTAAAGGATGATGACGCTGTTCAATTGTCATTAACAGAACTTCAAATTTTGAAA
ATGTTATTCCAAAATGAAGGAAAATACGTGAGTCGTACAGCATTAATTGAAAAGTGTTGGGAATCTGAAAACTTTATTGA
TGACAATACCTTAGCAGTTAATATGACTAGATTACGCAAGAAGTTATTATCTATAGGCGTTGATGATTTTATTGAAACTA
AGAAAAATGTCGGATATAGGGTTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0S4M7T5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

83.258

100

0.833