Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ND678_RS17830 Genome accession   NZ_CP098758
Coordinates   3736743..3737339 (+) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain KP167     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3731743..3742339
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ND678_RS17810 (ND678_17810) - 3731936..3733693 (-) 1758 WP_004147851.1 Lon protease family protein -
  ND678_RS17815 (ND678_17815) matP 3733879..3734331 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ND678_RS17820 (ND678_17820) ompA 3734462..3735532 (-) 1071 WP_002898408.1 porin OmpA -
  ND678_RS17825 (ND678_17825) sulA 3735885..3736394 (-) 510 WP_004179215.1 SOS-induced cell division inhibitor SulA -
  ND678_RS17830 (ND678_17830) sxy/tfoX 3736743..3737339 (+) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  ND678_RS17835 (ND678_17835) yccS 3737353..3739488 (-) 2136 WP_009485780.1 YccS family putative transporter -
  ND678_RS17840 (ND678_17840) - 3739506..3739952 (-) 447 WP_002898425.1 YccF domain-containing protein -
  ND678_RS17845 (ND678_17845) helD 3740077..3742131 (+) 2055 WP_009485779.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=697791 ND678_RS17830 WP_004179217.1 3736743..3737339(+) (sxy/tfoX) [Klebsiella pneumoniae strain KP167]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=697791 ND678_RS17830 WP_004179217.1 3736743..3737339(+) (sxy/tfoX) [Klebsiella pneumoniae strain KP167]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTATTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51