Detailed information NTG0069766

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: HXS63_RS22215
• Genome accession: NZ_AP023226
• Coordinates: 4646147..4647172 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain YJ3
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4641147..4652172

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HXS63_RS22195	metJ	4642208..4642525 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
HXS63_RS22200	yiiX	4642709..4643317 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
HXS63_RS22205	rpmE	4643378..4643590 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
HXS63_RS22210	priA	4643793..4645991 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
HXS63_RS22215	cytR	4646147..4647172 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
HXS63_RS22220	ftsN	4647264..4648223 (+)	960	WP_000068828.1	cell division protein FtsN	-
HXS63_RS22225	hslV	4648316..4648846 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
HXS63_RS22230	hslU	4648856..4650187 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
HXS63_RS22235	menA	4650254..4651180 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
HXS63_RS22240	rraA	4651273..4651758 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
HXS63_RS22245	zapB	4651843..4652088 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=69766 HXS63_RS22215 WP_000644904.1 4646147..4647172(+) (cytR) [Escherichia coli strain YJ3]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=69766 HXS63_RS22215 WP_000644904.1 4646147..4647172(+) (cytR) [Escherichia coli strain YJ3]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628